Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2152 ATGGCAGAAGCGAAGAGCAGAGACGCCCGAAGACGAAGAAGGATCCTCGAACAAGGATCCGACCGTCTCGCCTTCATAAGCGGTCGGATCCAAACACTTCCCGATTCGCCTTCATCTTCTCAATCCCAACCCCACGATCCAAACACCACCCTTCCTGCTCCTGTTGACGACTCGGATTCCACTTCGCAAAACCGCGAACCCTACAACCACGACGCTTCCAACGCCGTAATCCAAACACCCCCTAAGGGCGAAAGCGAGATTTCAAGTGTCCCAAGTTCTGAACCCGAACCCGAACCCGAACCTGTTCAAGTACAACCGCCGCCGCCACAGGCTGTGGAACCCAAACGTTTCATCATCCCAAGCGACATAACTCATGCCATCGACGCCTCAAAGGGTACCCGTCTTTGTTGTTCCGTTCTCGTGGCCCTTCTAGTGCTCGCATCTTACCCGGGTTTCTCCTTCCTGGgttccaaattttttaaaaccgtGATAGGCTTTAGGCCACTGTACCTGGTTCTCGTGACCAATCTAACGGCTGTGATTGCGAGACTCTTTTCTTGCAAACAGAGGGGTTTTGAAAGAAGACAGAGTAGAGGCTCttctggtggtggtggtgttggagGAGATGAATATGCACAGCTTGCAAAGGCATTGGAACTCTGTCTTGTGGTGCAGAACGCGGCCGATGCTGTGTTCATGGATTGTGCTGTCTATGCAGTCGTTCTCGTGTGCGGCCTTGCTCTTCTCCACACATGA 756 0.5 MAEAKSRDARRRRRILEQGSDRLAFISGRIQTLPDSPSSSQSQPHDPNTTLPAPVDDSDSTSQNREPYNHDASNAVIQTPPKGESEISSVPSSEPEPEPEPVQVQPPPPQAVEPKRFIIPSDITHAIDASKGTRLCCSVLVALLVLASYPGFSFLGSKFFKTVIGFRPLYLVLVTNLTAVIARLFSCKQRGFERRQSRGSSGGGGVGGDEYAQLAKALELCLVVQNAADAVFMDCAVYAVVLVCGLALLHT 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2152 251 MobiDBLite consensus disorder prediction 1 19 - -
Ssu3g2152 251 MobiDBLite consensus disorder prediction 31 92 - -
Ssu3g2152 251 MobiDBLite consensus disorder prediction 94 114 - -
Ssu3g2152 251 PANTHER TRANSMEMBRANE PROTEIN 1 248 - -
Ssu3g2152 251 MobiDBLite consensus disorder prediction 1 114 - -
Ssu3g2152 251 PANTHER TRANSMEMBRANE PROTEIN 1 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2152 Ssu-Chr3 70239333 70240224 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2152 - - gmx:100813081 233.417