Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2136 ATGAGTCTCGGCCACCGTCACCCTCCGCCGGCGGCCACCACTCCCGGCGGCCGCGACGACGAGCCTTTCAACATCATCCCGGTGCACAACCTCCTCGCGGACCACCCTTCCCTCCGCTTCCCGGAGGTCCGCGCGGCCGTGGCGGCTCTCCGCGCCGTCGGCGACCTCCGGCGGCCGCCGTTCGGGCAATGGCGGCCGACCATGGACCTCCTCGACTGGGTGGCGCTCTTCTTCGGCTTCCAGCGCGACAACGTTCGCAACCAGCGCGAGCACTTGGTGCTCCACCTCGCGAACGCTCAGATGCGCCTCACGCCGCCGCCGGACAACATCGACACGCTGGACGCCGGCGTGCTCCGGCGCTTCCGCAAGAAGCTGCTGAAGAACTACACCGCGTGGTGCTCGTACCTCGGGAAGAAGTCCAACATCTGGATCTCCGACCACCGCCGCGGCGACGCCGACCTCCGTCGCGAGCTCCTCTACGTGTCGCTCTACCTCCTGATCTGGGGCGAGGCGGCGAATCTGCGCTTCATGCCGGAGTGCATCTGCTACATCTTCCACAACATGGCGAACGAGTTGAACCGAATCTTGGAGGATTTCATCGACGAGAACACGGGGCAGCCGGTGATGCCGTCGATTTACGGTGAGAACGCGTTTTTGAACTTTGTCGTGAGGCCTATTTACGAGACTGTTAAGCGCGAGGTTGAGAGTAGTAGGAATGGGACCGCGCCTCACAGTGCTTGGAGGAACTATGACGATATTAACGAGTATTTTTGGAGTAAGAGGTGTTTTGAGAAGCTGAAGTGGCCTCTTGATGTTGGGAGTAATTTCTTTGTTACCGCTGGTGGGGGAAAGCATGTGGGGAAGACTGGGTTTGTGGAGCAGAGGTCGTTTTGGAATTTGTTTAGGAGTTTTGATAGGCTTTGGGTGATGTTGATATTGTTTCTTCAGGCGGCGATTATTGTGGCTTGGGAGGGGAGGACTTACCCTTGGCAGGCTTTGGAGGAGAGGACTGTGCAGGTTAGGGTTTTGACCATTTTTTTCACCTGGAGTGGTTTGAGGTTTCTGCAGAGTTTGCTTGATGTGGGGATGCAGTATAGGTTGGTGTCCAGGGAGACGATGGGGCTTGGAGTGAGGATGGTGCTGAAGTGTGTTGTGGCTGCTGGGTGGATTATTGTGTTTGGGGTGTTTTATGGGAGGATATGGACGCAGAGGAACCAGGATAGGAGGTGGTCGCCGGCCGCAGATAGGCGGGTGGTGAACTTTCTGGAGGTTGTGTTTGTGTTCATCATTCCAGAGCTTCTGGCGGTGGCTCTTTTTATCATTCCTTGGATTAGGAATTTTATCGAGAACACGAATTGGAGGGTTTTCTACATGTTGTCGTGGTGGTTTCAGAGCAGGAGCTTTGTGGGGCGTGGTTTGAGGGAAGGTCTTGTGGACAATGTGAAGTATTCGTTGTTCTGGGTTGTGGTGCTGGCCACGAAATTTTGCTTCAGTTACTTTTTGCAGGTGAAACCCATGATTGCTCCAACAAAGGCAGTGTTGAGGCTTGAAAATGTTGAGTATGAATGGCATGAGTTTTTTCATAACAGCAACCGGTTTGCAGTTGGGTTGTTGTGGCTTCCGGTTGTTTTGATTTATCTGATGGATATACAGATTTGGTATTCGATATACTCGTCGTTTGTTGGGGCGGCTGTGGGGTTGTTTGCTCACTTGGGTGAGATTCGAAATATGCAACAGCTGAAATTGAGGTTCCAGTTTTTTGCCAGTGCAATTCAGTTTAATCTCATGCCAGAGGAGCAATTGTTGAATACAAGGGGAACGTTGAAGAGTAAGTTTAAGGATGCCATCCACAGGCTGAAGCTCAGGTATGGGCTTGGTCGGCCATTTAAGAAGCTCGAGTCTAACCAGATCGAGGCCAACAAGTTTGCTTTGATATGGAATGAGATAATTCTGTCTTTTAGGGAGGAGGATATTATATCTGACAAAGAGTTTGAGTTGCTGGAGCTGCCACAAAACTCTTGGAATGTCAGAGTGATCCGCTGGCCATGTTTTCTTCTCTGCAATGAGCTACTGTTGGCACTCGGTCAGGCCAAAGAACTTGTTGATGATAGTGATAAGAGGCTTTATAGGAAGATATGCAAGAGTGAGTACAGACGCTGTGCTGTCATCGAAGCTTATGATAGTGTCAAGCACTTGCTTCTTGAGATTATCAAACCCAACACGGAAGAGCATTCTATTGTGACTGTTCTGTTTCAGGAAATTGATCACTCTCTTGAGATTGAGAAGTTCACTAAAATGTTCAAAACAACTGCACTGCCTCAGCTCCACCACAAGTTGATAAAACTTGTTCAGTTATTAAACAAGCCCAAGAAAGATCCTAACCAAGTGGTGAATACCCTTCAAGCCCTTTATGAGATTGCTACCAGAGACTTTTTCAAGGAGCAAAGAAATGCTGATCAGCTAAAGGAGGATGGTTTGGCTCAACAGAATCCTGCTACAGGTCTACTTTTTGAGAATGCCATCCAGTTGCCTGACACCAACAATGAGAACTTCCATCGGCAGGTTCGGCGCTTGTACACAATTCTTACATCCAATGATTCAATGCAAAACATCCCAGTAAATTTAGAAGCTAGACGGAGAATTGCTTTCTTCAGTAACTCACTTTTTATGAACATGCCCCATGCTCCCCAAGTTGAGAAAATGATGGCTTTCAGTGTTCTAACGCCTTACTATAGTGAAGAAGTATTATACAGCAAAGAACAGCTCAGAAATGAGAATGAAGATGGGGTTTCAATTCTGTACTACTTGCAGACTATATATGATGATGAGTGGAAAAATTTTGTGGAGAGGATGCGTCGGGAGGGGATGACAAAAGACAGTGATATTTGGACTGTCAAACTTAGAGATTTGAGGCTCTGGGCTTCCTACAGAGGCCAGACACTGTCACGAACAGTTAGAGGAATGATGTACTACTACCATGCCCTCAAGATGTTGACTTTTCTGGATTCTGCATCAGAAATGGATATTCGAGAAGGTGCCCGTGAACTTGTTTTAATGAGGCGAGATAATTTAGACAATTTCAACTCTAAAAGGTCACCTTCCTCTAAGAGTTTAAGTAGGGCAAGCAGTTCAGTCAGTTTGTTATTCAAAGGCCATGAGTATGGGACTGCTTTAATGAAATTCACATATGTGGTTGCTTGCCAGATATATGGAACccagaaggaaaaaaaggatCCTCATGCTGATGAAATTCTGTATCTAATGCAAAACAATGAGGCCCTTCGAGTTGCGTATGTTGATGAGAAAACAACTGGAAGGGATGAGAAGGAGTATTACTCTGTTCTTGTTAAGTATGATCAACAGTTGCAGAAGGAGGTTGAAATTTACCGCGTAAAATTGCCTGGGCCCTTGAAACTTGGGGAAGGAAAGCCAGAAAATCAAAACCATGCCATCATCTTCACCCGTGGTGATGCAGTTCAGACTATTGATATGAATCAGGACAACTACTTTGAAGAGGCACTTAAAATGCGAAATCTCTTGGAAGAATACAGGCATTACTATGGTATCCGTAAACCCACTATTTTGGGAGTTAGGGAACACATTTTTACTGGTTCTGTTTCCTCTCTTGCTTGGTTCATGTCAGCTCAGGAAACGAGTTTTGTCACCTTAGGACAGAGGGTTTTGGCAAATCCTTTGAAGGTTAGAATGCATTATGGTCACCCAGATGTGTTTGACAGGTTTTGGTTCTTGACTCGAGGTGGTATCAGTAAAGCTTCCCGAGTGATCAACATAAGCGAGGACATCTTTGCTGGATTTAATTGTACTCTTCGGGGAGGTAATGTCACTCACCATGAATACATTCAGGTTGGAAAGGGAAGGGATGTTGGGTTGAATCAAGTATCAATGTTTGAAGCGAAGGTTGCTAGTGGAAACGGGGAGCAAGTCCTAAGTAGAGATGTGTATAGATTGGGTCATAGGCTGGATTTTTTCCGGATGCTGTCATTCTTCTACACTACTGTGGGGTTCTTCTTCAACACAATGATGGTGATTCTGACTGTATATGCATTTTTGTGGGGTCGACTATATCTTGCACTCAGTGGTGTTGAGAATGCAATGGAAAGTAACAGCAATAACAATAAAGCACTTGGTACCATCTTGAATCAGCAGTTCATCATCCAACTTGGACTTTTCACTGCCCTTCCAATGATTGTAGAAAATTCCCTTGAGCATGGGTTCCTTCTAGCTATCTGGGATTTCTTGACAATGCAGCTCCAGCTTTCATCAGTTTTTTACACATTCTCAATGGGCACTCGTAGTCATTTCTTTGGTCGGACTGTTCTGCATGGTGGGGCAAAATATCGAGCTACTGGTCGTGGTTTTGTTGTAGAGCACAAGAGATTTGCTGAAATCTATCGACTCTTTGCCCGTAGCCATTTTGTGAAAGCAATTGAATTGGGGCTAATACTTGTAATTTATGCATCACATAGTCCTGTAGCGACTGACACATTTGTTTATATAGCCTTGACCATCACTAGTTGGTTCTTAGTTGTATCATGGATTTTGACGCCATTTGTGTTCAATCCTTCTGGATTTGATTGGTTAAAAACTGTTTATGACTTTGATGACTTTATGAACTGGATTTGGTACAGTGGAAGTGTGTTTGCTAAAGCTGAACAGAGCTGGGAAAGGTGGTGGTACGAAGAGCAGGATCATCTAAAGGTTACTGGCCTTTGGGGAAAGCTTTTGGAGATAATCTTAGACCTTCGGTTCTTCTTTTTCCAGTATGGAATTGTCTATCAGCTAGGCATTTCTGATCAAAGTACCAGTATTGCTGTTTACTTGCTATCTTGGATTTATGTGTTTGTTGTATCTGGGATTTACGCGGTGGTAGTGTATGCCCGGAACAAATATGCAGCCAAAGAGCATATCTATTATCGACTGGTCCAGTTCCTTGTCACAATTCTTGCAATACTTGTGATTGTTGGTCTACTGGAATTCACTCAATTCAAATTCATGGATATTTTTACTAGCCTGTTGGCATTCATTCCCACGGGCTGGGGCCTGATATTGATTGGCCAAGTATTCCGGCCATTTTTGCAGTCCACTATCATTTGGGATGGTGTTGTTTCAGTGGCTCGTCTATATGATATAATGTTTGGAGTCATTGTTATGGTCCCTGTGGCACTACTATCATGGTTGCCTGGATTTCAGAATATGCAAACCAGAATTCTTTTTAATGAAGCATTCAGCAGGGGCCTCCGGATATTCCAGATTCTTACAGGGAAAAAATCACAGAGTTGA 5301 0.4565 MSLGHRHPPPAATTPGGRDDEPFNIIPVHNLLADHPSLRFPEVRAAVAALRAVGDLRRPPFGQWRPTMDLLDWVALFFGFQRDNVRNQREHLVLHLANAQMRLTPPPDNIDTLDAGVLRRFRKKLLKNYTAWCSYLGKKSNIWISDHRRGDADLRRELLYVSLYLLIWGEAANLRFMPECICYIFHNMANELNRILEDFIDENTGQPVMPSIYGENAFLNFVVRPIYETVKREVESSRNGTAPHSAWRNYDDINEYFWSKRCFEKLKWPLDVGSNFFVTAGGGKHVGKTGFVEQRSFWNLFRSFDRLWVMLILFLQAAIIVAWEGRTYPWQALEERTVQVRVLTIFFTWSGLRFLQSLLDVGMQYRLVSRETMGLGVRMVLKCVVAAGWIIVFGVFYGRIWTQRNQDRRWSPAADRRVVNFLEVVFVFIIPELLAVALFIIPWIRNFIENTNWRVFYMLSWWFQSRSFVGRGLREGLVDNVKYSLFWVVVLATKFCFSYFLQVKPMIAPTKAVLRLENVEYEWHEFFHNSNRFAVGLLWLPVVLIYLMDIQIWYSIYSSFVGAAVGLFAHLGEIRNMQQLKLRFQFFASAIQFNLMPEEQLLNTRGTLKSKFKDAIHRLKLRYGLGRPFKKLESNQIEANKFALIWNEIILSFREEDIISDKEFELLELPQNSWNVRVIRWPCFLLCNELLLALGQAKELVDDSDKRLYRKICKSEYRRCAVIEAYDSVKHLLLEIIKPNTEEHSIVTVLFQEIDHSLEIEKFTKMFKTTALPQLHHKLIKLVQLLNKPKKDPNQVVNTLQALYEIATRDFFKEQRNADQLKEDGLAQQNPATGLLFENAIQLPDTNNENFHRQVRRLYTILTSNDSMQNIPVNLEARRRIAFFSNSLFMNMPHAPQVEKMMAFSVLTPYYSEEVLYSKEQLRNENEDGVSILYYLQTIYDDEWKNFVERMRREGMTKDSDIWTVKLRDLRLWASYRGQTLSRTVRGMMYYYHALKMLTFLDSASEMDIREGARELVLMRRDNLDNFNSKRSPSSKSLSRASSSVSLLFKGHEYGTALMKFTYVVACQIYGTQKEKKDPHADEILYLMQNNEALRVAYVDEKTTGRDEKEYYSVLVKYDQQLQKEVEIYRVKLPGPLKLGEGKPENQNHAIIFTRGDAVQTIDMNQDNYFEEALKMRNLLEEYRHYYGIRKPTILGVREHIFTGSVSSLAWFMSAQETSFVTLGQRVLANPLKVRMHYGHPDVFDRFWFLTRGGISKASRVINISEDIFAGFNCTLRGGNVTHHEYIQVGKGRDVGLNQVSMFEAKVASGNGEQVLSRDVYRLGHRLDFFRMLSFFYTTVGFFFNTMMVILTVYAFLWGRLYLALSGVENAMESNSNNNKALGTILNQQFIIQLGLFTALPMIVENSLEHGFLLAIWDFLTMQLQLSSVFYTFSMGTRSHFFGRTVLHGGAKYRATGRGFVVEHKRFAEIYRLFARSHFVKAIELGLILVIYASHSPVATDTFVYIALTITSWFLVVSWILTPFVFNPSGFDWLKTVYDFDDFMNWIWYSGSVFAKAEQSWERWWYEEQDHLKVTGLWGKLLEIILDLRFFFFQYGIVYQLGISDQSTSIAVYLLSWIYVFVVSGIYAVVVYARNKYAAKEHIYYRLVQFLVTILAILVIVGLLEFTQFKFMDIFTSLLAFIPTGWGLILIGQVFRPFLQSTIIWDGVVSVARLYDIMFGVIVMVPVALLSWLPGFQNMQTRILFNEAFSRGLRIFQILTGKKSQS 1766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2136 1766 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 157 269 IPR026899 -
Ssu3g2136 1766 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 4 1766 - -
Ssu3g2136 1766 MobiDBLite consensus disorder prediction 1 20 - -
Ssu3g2136 1766 PANTHER GLYCOSYL TRANSFERASE, FAMILY 48, 1,3-BETA-GLUCAN SYNTHASE SUBUNIT FKS1-LIKE, DOMAIN-1-RELATED 4 1766 - -
Ssu3g2136 1766 SMART FKS1_dom1_2 155 271 IPR026899 -
Ssu3g2136 1766 Pfam 1,3-beta-glucan synthase component 871 1660 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2136 Ssu-Chr3 69865003 69870303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2136 1 1766 Glycosyltransferase AT4G03550 74.860 0.0 2767
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2136 K11000 - gmx:100811121 3345.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2136 3 69865003 69870303 Ssu3g2136 3 69865003 69870303 ECH