Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2094 ATGGATGTTCATGTGAATCCTCAACAACACCTTTTGGAAAACGAACCTGCACCCCACAAAACACCCAAAACACCAGCCCAAAGAACCATGAGAAAGGCATTCAAAGGCACAGCTCATCTGGCCAAGCTTCTTCCAACAGGAACAGTGCTCATATTCCAAACTCTCTCACCACTTTTCACACACCAAGGCCAATGCCACACCACAACAAGCAAAGTCATGACCATAGGTCTCTTAACCTTTTGCAGCATCTCATGCTTTCTTCTGTCCTTCACTGACAGCTTCAGGGATGAGAGGGGAAAAGTTAGATATGGGGTGGCCTCATTGAATGGATTGTGGGTTATGGATGCATCAGTGAGGCTTCCTGTTGATGAGGCAGATAAGTATGGGCTAAGGTTCATTGATTTCTTCCATGCATTCATGTCAATATTGGTTTTCTTGGCAATTGCACTCTTTGATGGAAGTGTAGTGAGCTGTTTTGTTCCAAAGCCTTCTGAGGAGGCCAAGGAGCTTCTGGTGGCTTTGCCTATTGGGATTGGCATTGTGTGCAGTGTTCTATTTGTTGCATTCCCTAGCCAAAGACATGGGATTGGCTTCCCACTCTCACGCAATTAG 612 0.4575 MDVHVNPQQHLLENEPAPHKTPKTPAQRTMRKAFKGTAHLAKLLPTGTVLIFQTLSPLFTHQGQCHTTTSKVMTIGLLTFCSISCFLLSFTDSFRDERGKVRYGVASLNGLWVMDASVRLPVDEADKYGLRFIDFFHAFMSILVFLAIALFDGSVVSCFVPKPSEEAKELLVALPIGIGIVCSVLFVAFPSQRHGIGFPLSRN 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2094 203 MobiDBLite consensus disorder prediction 1 25 - -
Ssu3g2094 203 PANTHER PROTEIN DMP3 5 203 IPR007770 -
Ssu3g2094 203 PANTHER PROTEIN DMP7 5 203 - -
Ssu3g2094 203 Pfam Protein of unknown function (DUF679) 36 198 IPR007770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2094 Ssu-Chr3 68978933 68979544 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2094 - - ccaj:109805714 349.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2094 3 68978933 68979544 Ssu3g2094 3 68978933 68979544 ECH