Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2069 ATGGGTACTACTGAACGTTGGCCGAGAATGTTGATCCTCAATAGCAAAGCTGAAGTTGAAGCTGATGAGAGGACCAAGAAAAGACTCCTCAACGGTAGAGATAACTATCGTAGAAGAAAGTTTCGTTCTTCCCCTCCTTCTCCTTCTGGGCCTCTCGCCGTTCTGCGCCGGCGCGCCGGCGTTCCCTCGCAGGAGCTGTGGTGCGTGGCGAAGAACAACGCCGAGGACGCGTCGCTGCAGGCCgcgctggattgggcctgcggGGCCGGCGGAGCGGACTGCGGCCCAATCCAGGCGGGGGACCCTGCTACGACCCCAACAGCGTGCAGAATACGGCGTCGTCATGACAATTGCAAGTTCCCCTCCGGTGTGACGGGAAGCAGTGGGAGTTTTTCTGGATCAACACCCTCTTCATCTGTTGGATTGGGACCAAGTGAAGATTTGAGTGGGTGCATGAGGGAGGTGAAACTGAAAATAGCCCTTGATTTGATGAGGGGAATGGCAAAAGAAAACGTTTTCCTTGTTCACGTTGCACAGACTGACGATCCAGTTCTCATGGAAGCAAAGCAAGAAGTTATGGTACAAAATGTTGGTGTCATCACTGAAGATGAAAAAGTAGTTGctatagaagaagaaatcaaTGATACAGAGGCATTGGTCATCAACATTGCTACTCAAGTTTCAAATGGTGTTGTCACACTATACAACACCGCTGCGATCGTAGATCCGGATTAG 735 0.4871 MGTTERWPRMLILNSKAEVEADERTKKRLLNGRDNYRRRKFRSSPPSPSGPLAVLRRRAGVPSQELWCVAKNNAEDASLQAALDWACGAGGADCGPIQAGDPATTPTACRIRRRHDNCKFPSGVTGSSGSFSGSTPSSSVGLGPSEDLSGCMREVKLKIALDLMRGMAKENVFLVHVAQTDDPVLMEAKQEVMVQNVGVITEDEKVVAIEEEINDTEALVINIATQVSNGVVTLYNTAAIVDPD 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2069 244 MobiDBLite consensus disorder prediction 122 144 - -
Ssu3g2069 244 PANTHER BETA-1,3 GLUCANASE 63 108 IPR044788 -
Ssu3g2069 244 PANTHER PLASMODESMATA CALLOSE-BINDING PROTEIN 5 63 108 - -
Ssu3g2069 244 MobiDBLite consensus disorder prediction 29 54 - -
Ssu3g2069 244 Pfam X8 domain 66 102 IPR012946 -
Ssu3g2069 244 SMART X8_cls 66 153 IPR012946 -
Ssu3g2069 244 MobiDBLite consensus disorder prediction 122 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2069 Ssu-Chr3 68312889 68317372 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2069 67 106 Glycoside Hydrolase AT2G05790 55.000 1.49e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2069 - - gmx:100810241 107.071