Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2018 ATGTATGCACGACACTTGGAGTTGCACATAGCTATGTACCCATGGCTTGCCATGGGACACATATCAGCATATCTCCAGCTCGCTAACAAATTAGCGAAAAGGGGACACAGAATATCCTTCTTCATACCCAAACGAACAAAGGCCAAGGTGGAGCATTTCAACCTCTATCCACAGTTAATAACCTTCGTCACCATCACCATTCCCCTAGTTGATGGCCTTCCTCCTGAGGCAGAGACCACTTTTGATGTTCCCATCTCCTTAGGCACACTTCTCATGACTGCCATGGATCGTACTGAGAAGGACATTGAACTACTTTTACTTGAGCTCAAACCCAACattgttttctttgattttgcATGTTGGATACCCAGCTTGACTCGGAGGTTAGGCATCAAGTCTGTTCATTACATAACCCTAAGCATGATATTTGCATCTTATATGGAATCCATGGAGAAGCAGTGTCGGGAAAAGAATTTAGTTGGAGATGACCTGAATCTGATGAATCCCCCAGCTGGGTTTCCAGATTCTTCCATCAAGCTTCATGCTCATGAGGTTCGAGCATTAGCTTCAGCCATCAAATCAGAATATGGAAGTGGTGTTCGTTTCTATGATCGCATGAGCACTGGCACCAGATTGCCTTCTCCAATAACAGTTGTAGCCTGGTTACCTGTTAGGGGCTCAAGTGTAACATTGGACTATATCAATATCCAACTCATGGAGACTATATTTTCCCACAAGGTTTGA 744 0.4328 MYARHLELHIAMYPWLAMGHISAYLQLANKLAKRGHRISFFIPKRTKAKVEHFNLYPQLITFVTITIPLVDGLPPEAETTFDVPISLGTLLMTAMDRTEKDIELLLLELKPNIVFFDFACWIPSLTRRLGIKSVHYITLSMIFASYMESMEKQCREKNLVGDDLNLMNPPAGFPDSSIKLHAHEVRALASAIKSEYGSGVRFYDRMSTGTRLPSPITVVAWLPVRGSSVTLDYINIQLMETIFSHKV 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2018 247 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 148 - -
Ssu3g2018 247 PANTHER UDP-GLYCOSYLTRANSFERASE SUPERFAMILY PROTEIN 7 218 - -
Ssu3g2018 247 PANTHER GLYCOSYLTRANSFERASE 7 218 - -
Ssu3g2018 247 Gene3D Glycogen Phosphorylase B; 7 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2018 Ssu-Chr3 66480642 66483169 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2018 7 242 Glycosyltransferase AT5G54010 38.655 4.18e-54 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2018 - K22794 gmx:100808470 245.358