Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2000 ATGCTAGAAGGCAAGGCTGTGATTGGTGAGACTGACATGCTTCAGACCATGCAGCAAGATGCACTGGATTTAGCATCCAAAGCACTCGATTTCTTCGATGTCACTGAAGCCATTGAGATAGCCCGATTTATAAAGAagGAATTTGATAGGATGCACGGACCTGGTTGGCAGTGCATTGTAGGCACTGATTTTGGTTCGTTTGTGACCCACTGCTGTGGCTGTTTCATCTATTTCTGCTTAGGCAACTTGGCCATTTTGCTGTTCAGGGGCTCAGCTGCTCCAGAGGCACATGAAAATCAGTTCTCAGCACTAGAGGCAGCCAAAGCATAA 330 0.4667 MLEGKAVIGETDMLQTMQQDALDLASKALDFFDVTEAIEIARFIKKEFDRMHGPGWQCIVGTDFGSFVTHCCGCFIYFCLGNLAILLFRGSAAPEAHENQFSALEAAKA 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2000 109 Pfam Dynein light chain type 1 5 89 IPR001372 GO:0007017|GO:0030286
Ssu3g2000 109 PANTHER DYNEIN LIGHT CHAIN 1 97 - -
Ssu3g2000 109 PANTHER DYNEIN LIGHT CHAIN 1 97 IPR001372 GO:0007017|GO:0030286
Ssu3g2000 109 SMART Dynein_light_2 1 90 IPR001372 GO:0007017|GO:0030286
Ssu3g2000 109 Gene3D Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 1 90 IPR037177 GO:0007017|GO:0030286
Ssu3g2000 109 SUPERFAMILY DLC 1 90 IPR037177 GO:0007017|GO:0030286
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2000 Ssu-Chr3 65346970 65347708 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2000 K10418 - gmx:100779040 221.09