Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1999 ATGGCGCCGCGTCTCTGGTCCTGCTTCGGCAGCAAGGGCGGCCGCGGCGGCGGCGACGACGTTGTCGAGCGGCGCGTGACGGCGGACCTCACGGCGGAGGAGCAGAAGCGCGGCGGGCCCGTGCTGGTGGAGATGTTCTCGTCGCAGGGGTGCGCCACGTCGCCGGCGGCGGAGCTCGTGCTGTCGCGGCTGGGGAGGGGGGACTTCGAGCTGGAGGTGCCGGTGGTGGCGCTCGCCTTCCACGTCGACTACTGGGACTACGTGGGCTGGAAGGACCCCTTTGGGTCCAGCCAGTGGACCGTTAGACAGAAGGCCTATGTCGAGGCCCTTGGGCTCGACACCATGTTCACGCCCCAGGTCGTGGTCCAAGGCAAGGCCCAGTGCGTTGGAAATGACGAGAACGCCCTCGTCGGTGCCATCACCAACGCCCCTAGATTTCCTGCTCCAACCTTCCAGGCAACTTTCACCAGGCCTGCACCAGATTCATTGCATGTGTCCCTAACTGGAGCATTGAGGACCAAGGTGGACAGCAATGGCGCCAATGTCATGGTAGCGTTATACGAAAGTGGTTTGGTCACTGACTGCCCAAGAGGGGAGAACAAAGGGCGCGTTCTATCCAACGACTATGTCGTTAGAAAGCTCGAAAAGCTCTGCACTGTCAAAGACATCTCTGCCAAGAAAACAGTATCAGGAACTGTTAATTTTTCCTTGTGGGAAGGATTCAACAGCAGCAAATGTGGTTTGGCTGTCTTTGTTCAGAGCAGCTCTCACCAGATTTTTGGTTCGCAGAGTTTTCAGCTGCCGGATGATATGTGA 816 0.5895 MAPRLWSCFGSKGGRGGGDDVVERRVTADLTAEEQKRGGPVLVEMFSSQGCATSPAAELVLSRLGRGDFELEVPVVALAFHVDYWDYVGWKDPFGSSQWTVRQKAYVEALGLDTMFTPQVVVQGKAQCVGNDENALVGAITNAPRFPAPTFQATFTRPAPDSLHVSLTGALRTKVDSNGANVMVALYESGLVTDCPRGENKGRVLSNDYVVRKLEKLCTVKDISAKKTVSGTVNFSLWEGFNSSKCGLAVFVQSSSHQIFGSQSFQLPDDM 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1999 271 Pfam Protein of unknown function (DUF1223) 42 253 IPR010634 -
Ssu3g1999 271 SUPERFAMILY Thioredoxin-like 38 257 IPR036249 -
Ssu3g1999 271 PANTHER - 1 271 IPR010634 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1999 Ssu-Chr3 65336807 65340734 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1999 - - gmx:100779569 482.256