Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1939 ATGAAACGTGGGTACCAGGAATCTCCTTCAACCTCGTTAGGTCCACCTCAATCCAGAGCTAGACATGATCCTCAAGGTGATGCACACTTTCTTGAGGATGAGAGCACAAAGATTTTTGCTCGGAAAGTAGCTGATCATTACAGTGCAAGATCCAACCAGACTTTGGAAGAACGGGAGGCTAGTCCGATAATTCATTTGAAGAAACTCAATAACTGGATTAAGAGTGTCTTAATTCAGCTTTATGCTCGTCGAGGAGATGCAGTAATTGACCTCGCCTGTGGCAAGGGTGGTGATCTTATCAAATGGGACAAGGCCAAAATTGGATATTATGTTGGTATTGACATTGCTGAAGGCTCGATCAAAGACTGTCGGACACGTTACAATGGGGATGCTGACCATCATCAGCGACGTAAAAAGTTTACATTTCCTGCTCGCCTTATATGTGGAGATTGTTATGAGGTTCGCTTGGACAAAGTTCTTGCAGATGATGCTCCTTTTGATATTTGTAGTTGCCAGTTTGCATTGCATTACTCATGGTCTACAGAGGCCCGTGCCCGGCAAGCATTGGCTAATGTGTCAGCTTTACTTCGCCCAGGAGGCATTTTCATTGGAACTATGCCTGATGCCAATGTGATTATCAAGAAGCTCAGAGAAGCTGAAGGATTAACTTTTGGTAACAGCGTCTATTGGGTGCGTTTTGATGAAGAATTTTCTGATAAGAAATTTAAGTCTTCCAGCCCTTTTGGAATAAAGTACACGTTCCATTTGGAGGATGCTGTTGACTGTCCTGAATGGATTGTTCCCTTCCACATATTCAAGTCATTAGCTGAAGAGTATGACTTTGAGCTTGTTTTGGCGAAAAACTCGCACGAATTTGTGCACGAGTATATGAAAAAACCGGAATTTGTGGAGCTCATGCGAAGACTCGGTGCATTGGGAGATGGCAACCAAGATCAAAGTACACTCTCAGCTGATGAATGGGAGGCAGCATATTTATACATGTCATTTGTATTGAGAAAGCGAGGTCAACCTGACAAAACCCAACTGAGTGGCAGAAGGGACCGAGGGTCGATGAACATTTCAGAGGAAGACATCATGTACATTAGCACTGATTATTAA 1119 0.4325 MKRGYQESPSTSLGPPQSRARHDPQGDAHFLEDESTKIFARKVADHYSARSNQTLEEREASPIIHLKKLNNWIKSVLIQLYARRGDAVIDLACGKGGDLIKWDKAKIGYYVGIDIAEGSIKDCRTRYNGDADHHQRRKKFTFPARLICGDCYEVRLDKVLADDAPFDICSCQFALHYSWSTEARARQALANVSALLRPGGIFIGTMPDANVIIKKLREAEGLTFGNSVYWVRFDEEFSDKKFKSSSPFGIKYTFHLEDAVDCPEWIVPFHIFKSLAEEYDFELVLAKNSHEFVHEYMKKPEFVELMRRLGALGDGNQDQSTLSADEWEAAYLYMSFVLRKRGQPDKTQLSGRRDRGSMNISEEDIMYISTDY 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1939 372 CDD AdoMet_MTases 88 203 - -
Ssu3g1939 372 Pfam mRNA capping enzyme 33 341 IPR004971 -
Ssu3g1939 372 PANTHER MRNA GUANINE-7- METHYLTRANSFERASE 1 368 IPR039753 GO:0004482
Ssu3g1939 372 ProSiteProfiles mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56) domain profile. 22 347 IPR004971 -
Ssu3g1939 372 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 70 340 IPR029063 -
Ssu3g1939 372 Gene3D Vaccinia Virus protein VP39 59 342 IPR029063 -
Ssu3g1939 372 PANTHER MRNA CAP GUANINE-N7 METHYLTRANSFERASE 1 368 - -
Ssu3g1939 372 MobiDBLite consensus disorder prediction 1 27 - -
Ssu3g1939 372 MobiDBLite consensus disorder prediction 1 18 - -
Ssu3g1939 372 PIRSF ABD1 3 343 IPR016899 GO:0004482|GO:0006370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1939 K00565 - gmx:100779811 731.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g1939 3 61778904 61786758 Ssu3g1939 3 61778904 61786758 ECH