Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1936 ATGGCAAAACTCTTTGACACTCCCTCCACCACAGTctttttgtctctctctctcctcctcctccttctccttctccttccactttctctctcctcctcCCCCTCCATCCACGACCTTCTCCGCTCAAAAGGGTTACCACCTGGCCTCTTGCCAGAAGAGGTGAAGTCCTACACTTTCTCGGAAAATGGTCACTTGGAAGTGTTCCTAGACGCACCTTGCTTGACCAAGTACGAGAACAGGGTCCTCTTCGAACAAGTGGTCACCGCTAACCTCACCTACGGTAGCCTCATAGGAGTGGAGGGTCTCAAACAAGAAGAATTGTTCGTGTGGCTACCCGTCAAGGACATAATTGTAAATGACCCTTCATCCGGGCTGATACTCTTTGACATTGGCCTCGCTCACAAACagctctcactctctctctttgaAGATCCACCTCACTGCAAGCCCGAAGGTGGTTTGAGGAATCATGTGAGGAAGGAAAAAGGTTTGGAGGCCCTGAGGTAG 507 0.4241 MAKLFDTPSTTVFLSLSLLLLLLLLLPLSLSSSPSIHDLLRSKGLPPGLLPEEVKSYTFSENGHLEVFLDAPCLTKYENRVLFEQVVTANLTYGSLIGVEGLKQEELFVWLPVKDIIVNDPSSGLILFDIGLAHKQLSLSLFEDPPHCKPEGGLRNHVRKEKGLEALR 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1936 168 PANTHER T31J12.3 PROTEIN-RELATED 15 167 IPR007493 -
Ssu3g1936 168 Gene3D - 24 149 IPR036758 -
Ssu3g1936 168 SUPERFAMILY At5g01610-like 12 150 IPR036758 -
Ssu3g1936 168 Pfam Protein of unknown function, DUF538 37 143 IPR007493 -
Ssu3g1936 168 PANTHER - 15 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1936 Ssu-Chr3 61723853 61725319 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1936 - - gmx:100790931 272.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g1936 3 61723853 61725319 Ssu3g1936 3 61723853 61725319 ECH