Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1914 ATGGCAGTCcaagtttatattgtGTACTACTCAATGTACGGGCATGTGGAGAGACTGgcagaagaaataaagaaaggagCAGATTCTGTGGAAGGCGTTGAAGCCAAACTATGGCAGGTAGCTGAGACATTGCCAGATGAGGTGCTTGGCAAAATGAGAGCACCACCCAAGAGTGATGTACCAATCATTACCCCCAATGAACTCTCTGAGGCTGATggttttgtctttggcttcccCACAAGATTTGGAATGATGGCTGCACAGTTCAAAGCTTTTCTAGATGCAACTGGAGGTTTATGGAAAACACAACAACTTGCAGGCAAGCCTGCAGGAATCTTCTACAGCACCAGTTCCCAAGGTGGTGGGCAAGAGACTACAGCGCTTACTGCTATAACTCAGCTGGTTCATCATGGAATGTTGTTTGTTCCAATTGGATACACATTTGGTGCTGGAATGTTCGAGATGGAGGAACTGAAAGGTGGAAGTCCGTATGGTTCAGGAACTTATGCTGGTGATGGTTCAAGACAGCCAACTAAGCTTGAGCTGGAGCAAGCATTCCACCAAGGCAAGTATATCGCCAGCATCACAAAGAAGCTCAAGGAAGCTGCATAA 612 0.4281 MAVQVYIVYYSMYGHVERLAEEIKKGADSVEGVEAKLWQVAETLPDEVLGKMRAPPKSDVPIITPNELSEADGFVFGFPTRFGMMAAQFKAFLDATGGLWKTQQLAGKPAGIFYSTSSQGGGQETTALTAITQLVHHGMLFVPIGYTFGAGMFEMEELKGGSPYGSGTYAGDGSRQPTKLELEQAFHQGKYIASITKKLKEAA 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1914 203 PANTHER FLAVODOXIN-RELATED PROTEIN WRBA-RELATED 5 203 - -
Ssu3g1914 203 Pfam NADPH-dependent FMN reductase 17 144 IPR005025 GO:0016491
Ssu3g1914 203 PANTHER FLAVOPROTEIN WRBA, FLAVOPROTEIN-LIKE DOMAIN PROTEIN-RELATED 5 203 - -
Ssu3g1914 203 ProSiteProfiles Flavodoxin-like domain profile. 5 192 IPR008254 GO:0010181
Ssu3g1914 203 SUPERFAMILY Flavoproteins 4 200 IPR029039 -
Ssu3g1914 203 Gene3D - 2 201 IPR029039 -
Ssu3g1914 203 TIGRFAM flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 3 199 IPR010089 GO:0003955|GO:0010181
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1914 Ssu-Chr3 60260376 60262511 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1914 K03809 - gmx:100793045 400.979