Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1861 ATGCATCCTGCACAGATCGTTTTGTATGGATCAACTTTGTGTGTCATGATAACAGTGCACTTCTCTATGAAGCTACTTGCAGAACATGTTTTGAACTGGAAGAAACCAAAGGAGCAAAAGGCCATAGTAATTATAATCCTTATGGCCCCATTGTATGCTGTGGACTCCTATGTTGGTTTGATAAATTTCTTTGGAAGTGAAGCATTTTTCACATTCTTGGACTCAATTAAGGAGTGTTATGAGGCTCTGGTGATTGCTAAGTTCTTGAGCTTGATGTACAGTTATTTGAACATTTCGTTGAGTAAGAACATAGTGCCGGATGAGATCAAGGGAAGAGAGATTCACCATTCATTTCCAATGACTCTTTTTCAGCCTCATACTACTCGTCTGGACCATCATACACTGAAGCTTCTCAAAAACTGGACTTGGCAATTTGTTGTGATACGTCCGGTGTGCTCAATCTTGATGATAACTCTACAGTATTTTGAAGTTTATCCCAGTTGGGTCAGCTGGACAAACACAATCATTCTAAACATTTCAGTGTCACTGGCACTGTATTCTCTTGTTGTTTTCTACCATGTGTTTGCTAAAGAGCTGGAACCACAGAAGCCTCTTGCCAAGTTTTTATGCATAAAAGGGATTGTCTTTTTCTGCTTCTGGCAGGGAATTGTGCTTGATCTCCTGGCAGCATTGGGAATAATCCGATCCCGTTATTCCTGGCTAGCCGTGGAACGTATTGAGGAAGGCTACCAAAACATTTTGGTTTGTGTTGAAATGGTTTTCTTCTCTGTATATCAGCAATATGCATACAGTGCTGCACCATACAAGGTTAATAACAAAAGTAGTGCATCTTCAGATAAAAAGTCAAAGTGA 873 0.3998 MHPAQIVLYGSTLCVMITVHFSMKLLAEHVLNWKKPKEQKAIVIIILMAPLYAVDSYVGLINFFGSEAFFTFLDSIKECYEALVIAKFLSLMYSYLNISLSKNIVPDEIKGREIHHSFPMTLFQPHTTRLDHHTLKLLKNWTWQFVVIRPVCSILMITLQYFEVYPSWVSWTNTIILNISVSLALYSLVVFYHVFAKELEPQKPLAKFLCIKGIVFFCFWQGIVLDLLAALGIIRSRYSWLAVERIEEGYQNILVCVEMVFFSVYQQYAYSAAPYKVNNKSSASSDKKSK 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1861 290 Pfam Organic solute transporter Ostalpha 10 275 IPR005178 -
Ssu3g1861 290 PANTHER ORGANIC SOLUTE TRANSPORTER-RELATED 1 289 IPR005178 -
Ssu3g1861 290 PANTHER DUF300 FAMILY PROTEIN 1 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1861 Ssu-Chr3 58143035 58145484 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1861 - - gmx:100808621 541.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g1861 3 58143035 58145484 Ssu3g1861 3 58143035 58145484 ECH