Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1857 ATGCATGGTGCTTTCTTGAGTGGCTTGAGGGAAGCTTCGCGCATTTACCGATCAGCCCGGGTTCAGCAAAGCAATCCTAGGAAGTTCACACCTAAGAATATTGGACCAAACAATGATATACTGGTTGATTTATTCAAGAGGCCTGATTTGGAATCTGGGAAATTTGCTTTCATTTTCGATCCTTCATCAGAAAGTCTGCAGTCAATGGGGCTTCTGCAAGTCACTTTTGGTGATACTGAAGAAAGTTACAAAGAGCTATTAAACAGCTATCCAAATCCCACAAAGTTTCCATTGCAGCTTTACACTATAATATCCCGGGAACAGGCGCAGAAGGTACAACAAATTGAGGGAGGGGATGAAAGCAGGTTGTCATATCTGGTAAAAAGCCTTGGCTTGAAGCTTATGGGATCAGCTGCTTTGTACACTGCAGGTAACACATTAATAGCAAGCATTGCTTATTCGCGAAAAGGCCGGGGGAGGAACCGCGTAATTACTTGTTAA 501 0.4331 MHGAFLSGLREASRIYRSARVQQSNPRKFTPKNIGPNNDILVDLFKRPDLESGKFAFIFDPSSESLQSMGLLQVTFGDTEESYKELLNSYPNPTKFPLQLYTIISREQAQKVQQIEGGDESRLSYLVKSLGLKLMGSAALYTAGNTLIASIAYSRKGRGRNRVITC 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1857 166 PANTHER LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 2 1 158 - -
Ssu3g1857 166 PANTHER FLAVIN MONOAMINE OXIDASE 1 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1857 Ssu-Chr3 58083530 58084030 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1857 - - pvu:PHAVU_011G154300g 261.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g1857 3 58083530 58084030 Ssu3g1857 3 58083530 58084030 ECH