Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1814 ATGAAACCTTTCCTTCTAATTCCAGCTACTACACTCCCATTCATTTCTCCAAACTCTAGCAGCACTGGCTTGTACAATGTTAGCTACAAAATCAGCATCAATCTAATACCTAATGCCAAGTTTGGTGAAGAGAAGTCCATGTTAAATACAACAACAAATATGACTGAAACAATGAATGTTTCAGCTGAAGGAATTTATGATGCTGAAGCTGGAAGCTTATGTATGGTAGGTTGCAGAAACCTTGGCTCAAAGAACCAAATACCGTCAACAAACACTCTGGACTGTGAGGTTATAGTCAAGTTTCAGTTCCCACGACTTGATGCAAAGAACAATGGAGGTTACATTAAAGGAAGTATAGAAAGCGTGCGCGAAAATTCAGATCCTCTTTACTTCAAGCAGTTGGATGTGACTTCAGCTGCATTTTACACAGCAGAAGCATCACAGATCTTACGGAAAGTAGATATGGAGGTCATAATGATTCTGGTTTGCACCACACTAGCATGTGTTTTTGTGGGTTTGCAACTCTACCATGTGAAAAGAAATCCTGATATGCTTCCCTTAATCTCCTTTGTCATGTTGTTGATTCTTACTTTGGGAAATATGGTACCCCTTGTTCTGAACTTTGAAGCCCTTTTTGCACGAAATCATGATAAGAAAAGCATTTTGCTTGGAAATGAATGGCTTGAAGTAAATGAAATTGCTGTAAGGCTAATTGTAATGGTAGCTTTCTTGTTGCAACTCCGTCTCCTGCAGCTAACATGGTCAGCAAGAAAGGCTGATACAAAGCAAAAGGACCTTTGGATTGCTGAGAAGAAGGTTTTGTATGTGATTTTGCCCTTATATGCAGCAGGGTTCTTGATTGCTTTGCTTGTACACCAAAACAATACTTTGCATGGTGATGTGGTGTCTTCATCTAGCATTTCACAACAACACTCATTTTGGGAGGACTTGAAATCTTATTCAGTTTGGTTAGAGTGCTTCCCCATGCATATGATCTCTTTGAGGCTCTTGTATATTGATGGTTCATCTTTATATGAGGATGAGATTGCAGACTACTACTCCACTGCTTGGGATATAATCATTCCTTTGCTAAGTCTTATGTTTGCTGTAATTGTCCATTTGCAACAACGATTTGGTGGTTGCAGCTTTCTTTCTTGGAGAATCAAGGGTATAGaagaatatgaaaaggtgcCTGTGGTGACTGAAGCATAG 1212 0.3886 MKPFLLIPATTLPFISPNSSSTGLYNVSYKISINLIPNAKFGEEKSMLNTTTNMTETMNVSAEGIYDAEAGSLCMVGCRNLGSKNQIPSTNTLDCEVIVKFQFPRLDAKNNGGYIKGSIESVRENSDPLYFKQLDVTSAAFYTAEASQILRKVDMEVIMILVCTTLACVFVGLQLYHVKRNPDMLPLISFVMLLILTLGNMVPLVLNFEALFARNHDKKSILLGNEWLEVNEIAVRLIVMVAFLLQLRLLQLTWSARKADTKQKDLWIAEKKVLYVILPLYAAGFLIALLVHQNNTLHGDVVSSSSISQQHSFWEDLKSYSVWLECFPMHMISLRLLYIDGSSLYEDEIADYYSTAWDIIIPLLSLMFAVIVHLQQRFGGCSFLSWRIKGIEEYEKVPVVTEA 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1814 403 PANTHER DUF2921 FAMILY PROTEIN 339 402 - -
Ssu3g1814 403 PANTHER FAMILY PROTEIN, PUTATIVE (DUF2921)-RELATED 16 325 IPR021319 -
Ssu3g1814 403 PANTHER DUF2921 FAMILY PROTEIN 16 325 - -
Ssu3g1814 403 Pfam Protein of unknown function (DUF2921) 339 383 IPR021319 -
Ssu3g1814 403 Pfam Protein of unknown function (DUF2921) 21 321 IPR021319 -
Ssu3g1814 403 PANTHER FAMILY PROTEIN, PUTATIVE (DUF2921)-RELATED 339 402 IPR021319 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1814 Ssu-Chr3 56902524 56903835 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1814 - - gmx:102664702 632.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g1814 3 56902524 56903835 Ssu3g1814 3 56902524 56903835 ECH