Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1812 ATGATTCTGGTGTGTACCATGATAGCATGTGTTTTCGTGGCTTTACAACTATTCCATGTGAAAAGGAATCCTGACATGCTTCCCTTAATCTCCTTTGTCATGCTATTGATTCTCACTTTGGGAAATATGATCTCTCTTGTTCTGAAATTTCATTCCCTTTTTGCACAAAATCAGgcaaagaaaaacattttgctTGCAAATGAATGGCTTGAGCTAAATGAAATTGCTATCCTCTCCGGCAACATAGTCAATGTCGAGGTTAGCCGCTACAACTCCTCCAAAGGACGCATTGTTTATAGGCTCCGCACCTGCACCCCTTTCTAG 324 0.392 MILVCTMIACVFVALQLFHVKRNPDMLPLISFVMLLILTLGNMISLVLKFHSLFAQNQAKKNILLANEWLELNEIAILSGNIVNVEVSRYNSSKGRIVYRLRTCTPF 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1812 107 Pfam Protein of unknown function (DUF2921) 1 77 IPR021319 -
Ssu3g1812 107 PANTHER DUF2921 FAMILY PROTEIN 1 77 - -
Ssu3g1812 107 Gene3D - 56 105 IPR012340 -
Ssu3g1812 107 PANTHER FAMILY PROTEIN, PUTATIVE (DUF2921)-RELATED 1 77 IPR021319 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1812 Ssu-Chr3 56835072 56836176 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1812 - - ccaj:109818444 129.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g1812 3 56835072 56836176 Ssu3g1812 3 56835072 56836176 ECH