Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1791 ATGGAAATCGGCTTAAGGCTCCAAGACACAGAAACCCCGCCTTCCATGAACTCCCCAAGAAGCAATCTCAGCAACTGCATGAACAGCACCAATAATAATAGCATTGGCATCCAAATCCCCACCACACCAAAATCCATCCCCAGATCTGACTCCACCCCTTACCCTACCACCTTTGTCCAAGCTGACACTTCCACTTTCAAACAGGTAGTTCAAATGCTCACTGGCTCATCAGAAACCACAAAGCCACACCCACAACAACAAGATCCAgttccaccaccaccatcatcaaaAAACTTCAACATCCCACCAATGAAAACGACACCAAAGAAGCAGCAAGGGTTCAAGCTCTATGAGAGGAGGAACAACAACCTCAAAAACACACTCATGATCAACACCTTGGTGCCCAATTTTGCACACAGCCCAGGGCTCTCCTCACCCCACAAGCCAGAGATCCTCTCCCCAAGCCTTCTTGACTTCCCTTCCCTCACTCTTAGCCCTGTCACTCCATTGAATGATGACCCTTTTGACAAGTCCTCACCTTCATTGGGAAGCTCCTCATCAGAGGAAGAGAAAGCCATAGCTGAAAAAGGGTTCTACTTGCATCCCTCTCCCTTGTCGACTCCAAGAGGCTTTGAGCCTCAGCTCTTGCCTTTGTTCCCTGTGACTTCACCTAGAGTTTCTGAGTCACCTTCTTGA 696 0.4698 MEIGLRLQDTETPPSMNSPRSNLSNCMNSTNNNSIGIQIPTTPKSIPRSDSTPYPTTFVQADTSTFKQVVQMLTGSSETTKPHPQQQDPVPPPPSSKNFNIPPMKTTPKKQQGFKLYERRNNNLKNTLMINTLVPNFAHSPGLSSPHKPEILSPSLLDFPSLTLSPVTPLNDDPFDKSSPSLGSSSSEEEKAIAEKGFYLHPSPLSTPRGFEPQLLPLFPVTSPRVSESPS 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1791 231 PANTHER VQ MOTIF-CONTAINING PROTEIN 11-LIKE 10 231 IPR039611 -
Ssu3g1791 231 MobiDBLite consensus disorder prediction 10 52 - -
Ssu3g1791 231 MobiDBLite consensus disorder prediction 1 52 - -
Ssu3g1791 231 MobiDBLite consensus disorder prediction 85 99 - -
Ssu3g1791 231 MobiDBLite consensus disorder prediction 168 231 - -
Ssu3g1791 231 Pfam VQ motif 53 79 IPR008889 -
Ssu3g1791 231 MobiDBLite consensus disorder prediction 168 188 - -
Ssu3g1791 231 MobiDBLite consensus disorder prediction 74 110 - -
Ssu3g1791 231 PANTHER VQ MOTIF PROTEIN 10 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1791 Ssu-Chr3 55852094 55852789 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1791 - - gmx:100526932 341.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g1791 3 55852094 55852789 Ssu3g1791 3 55852094 55852789 ECH