Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1765 ATGGCAGCGTGGCATTTCCTCAAACAGTTAACGTGCACCGTTGGCGCTCATTCTCCCACCCTCTCCCGCCGCCTCATAAACTGCTCATCAGTTGTAACCTTCCTCTCCACCCACCACAAAATTCTTAGGGTACCAATGGCTTCCCCATTTCCATGTCAATCTTCATGCCGCATCCCCAAATGCAATGTTTCCACAGCTTCTTCTTCCCCAACTCTATCAGACACGTCCTTGGCCCCACCAGCTCCTTATACTTCCGTTCTAATTCACTGTCCTAAAGACACGGCAGATGTGCTTGCAGAAGCTCTTTTGTGCTTTGGTGCAAGTTCTGTTAGCATGGATCAAGATGATGTCTCTCAGAGTATTGAAGAGATTTGTATTAGTTCAATATTTCCTGAAGTTGAGGATATAAATGTGAGCATTTCATATGCAGCTGACTCTATTGGTTTGAAGGAGATACCAAGATATGAAGTTAAAATTAATGAGGAGGACTGGATGAAGAGATCTCAGGAATTGTTTCATCCAGTTCAAGTTACTGAAGGCCTATGGGTGGTGCCCAAGTGGTGTACTCCACCAGATGTTCAAGCAACAAATATAATTGTCAATCCTGGACTAGCCTTTGGAACAGGGGAACATGCCAGTACCAAACTCTGTCTATTACTCTTACATGGTTGTATAAAAGGAGGGGAGCACATTCTGGACTATGGCACGGGAACTGGAATTCTTGCAATTGCGGCTCTTAAGTTTGGAGCTGCCTTTGCTGTTGGAGTTGATGTAGATTCAGAAGCAATTGCATCAGCATCTCAAAATGCTTCCCTGAACAACATCGAACCAGACAAAATGCAACTACACCTGATTGCTAGCAAAACCTCTTCGTCCTCCAAGGATGACTTGACATTTGGAGTTAGGGAGGGAGAACACACTTTTAAGATACAAACAGTCACTACTGAAAGGGATAAGTTTGATGTGGTCATCGCAAATATACTCTTAAATCCTTTATTGGATCTTGCTGATCAAATTGTCTCTTGTGCAAAGCCTGGAGCAGTTGTTGGTCTCTCTGGTATCTTATCTGAGCAGGTCCAGTACATCATAGAAAGATATTCACCATTCTTAGAAGGCATAGAAGTATCCAAAATGGATGACTGGGCCTGTGTGAGTGGCAGAAAAAGTAGATATTTGAATGTGAGATGA 1188 0.4335 MAAWHFLKQLTCTVGAHSPTLSRRLINCSSVVTFLSTHHKILRVPMASPFPCQSSCRIPKCNVSTASSSPTLSDTSLAPPAPYTSVLIHCPKDTADVLAEALLCFGASSVSMDQDDVSQSIEEICISSIFPEVEDINVSISYAADSIGLKEIPRYEVKINEEDWMKRSQELFHPVQVTEGLWVVPKWCTPPDVQATNIIVNPGLAFGTGEHASTKLCLLLLHGCIKGGEHILDYGTGTGILAIAALKFGAAFAVGVDVDSEAIASASQNASLNNIEPDKMQLHLIASKTSSSSKDDLTFGVREGEHTFKIQTVTTERDKFDVVIANILLNPLLDLADQIVSCAKPGAVVGLSGILSEQVQYIIERYSPFLEGIEVSKMDDWACVSGRKSRYLNVR 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1765 395 Hamap Ribosomal protein L11 methyltransferase [prmA]. 81 388 IPR004498 GO:0006479|GO:0008276
Ssu3g1765 395 Pfam Ribosomal protein L11 methyltransferase (PrmA) 83 388 - -
Ssu3g1765 395 PANTHER ELECTRON TRANSFER FLAVOPROTEIN BETA SUBUNIT LYSINE METHYLTRANSFERASE 82 389 - -
Ssu3g1765 395 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 152 387 IPR029063 -
Ssu3g1765 395 CDD AdoMet_MTases 231 349 - -
Ssu3g1765 395 Gene3D Vaccinia Virus protein VP39 170 392 IPR029063 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1765 - - gmx:100797477 612.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g1765 3 54030765 54036407 Ssu3g1765 3 54030765 54036407 ECH