Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1753 ATGGCAGCATCAGTTTCGTGCTCATGGCTAACCCTTCCCTCCCAAATGAGGAACCTTTCCCTcacttcctcctcttcttccctTTCCATCTCCAATTCTGCTTCTCTCGGTTTCTCCAGAAACCTCTCTCACCCTCTCTTCTCACAAGGTAACTGCCTGTCGTTGAGCACAGTGCAGAGGCGCGCGTCTGTGGTTTGCGAGGCTGTTCCGAAGAAAAAGGTGGATTCGGCAGTAAAGAGAGCTGGCCAAGCCGAGAAACGCCGCATTTACAACAAGGCTCGCAAATCGGAGATAAAAACGCGTACCAAGAAGGTTTTGGAAGCTCTGGAAGTGCTTAAGAAGAAACCAGATGCACAAGCCGAAGAAATCCTCCCAATTGAGAAGTTGATTGGAGAGGCATACTCAGTAATTGACAAAGCCGTGAGAGTGGGCACACTGCACAGGAACACTGGAGCAAATCGCAAGGCTCGTCTTGCCCGAAGAAAGAAGGTGGTGGAGATCCATCATGGCTGGTATACCCCAGTTCCTGAAGCCAGTGCGTGA 543 0.488 MAASVSCSWLTLPSQMRNLSLTSSSSSLSISNSASLGFSRNLSHPLFSQGNCLSLSTVQRRASVVCEAVPKKKVDSAVKRAGQAEKRRIYNKARKSEIKTRTKKVLEALEVLKKKPDAQAEEILPIEKLIGEAYSVIDKAVRVGTLHRNTGANRKARLARRKKVVEIHHGWYTPVPEASA 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1753 180 PANTHER 30S RIBOSOMAL PROTEIN S20 1 179 IPR002583 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Ssu3g1753 180 SUPERFAMILY Ribosomal protein S20 75 176 IPR036510 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Ssu3g1753 180 PANTHER 30S RIBOSOMAL PROTEIN S20, CHLOROPLASTIC 1 179 - -
Ssu3g1753 180 Gene3D Ribosomal protein S20 74 180 IPR036510 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Ssu3g1753 180 TIGRFAM S20: ribosomal protein bS20 73 160 IPR002583 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Ssu3g1753 180 Hamap 30S ribosomal protein S20 [rpsT]. 61 164 IPR002583 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Ssu3g1753 180 Pfam Ribosomal protein S20 75 161 IPR002583 GO:0003723|GO:0003735|GO:0005840|GO:0006412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1753 K02968 - gmx:100786192 286.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g1753 3 53574529 53577480 Ssu3g1753 3 53574529 53577480 ECH