Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1752 ATGGACGATCCATCTCAACTCCTCGAAGCAGCTTCTGATTTTGCCCACTACCCAGGGGTGCAAAGCGATGATTCCACCAGGGACTTTCTTAATCGCTTCCCTTTCCCACTCATTATcaaTGCATTGCAGACTCAACTTGATGTGCCTGGCCTAGAAAATACTCTAGTTGCATGCCTCGAAAGGATATTCAATACGAAGTTGGGTGCTTCTTTGATCCCACAGTATATGCCTTTTGTTCAAGTTGGTCTGCAGGCAGATTCTCAAGCAGTCAGATCCTTAGCTTGCAAAACAGTCACTTGCCTTCTGGACAATTTTGACAATGATTACAAAGTTGCTGCTCGTCTAATTAAAGACTTCAACATATATCCTCTTTTGCTTGATTGCCTTATAAATGGCAATGAACATGTGGCGGCTGTAGCAATGGATGCAATAAAAAAGTTAGCTGGTTTTCCTGAAGGCATGGAAATTATCTTTCCATCTGCTAAAAGAGGTGATACAGACCTAGGGATCATAGCATCACAATGTTCATCACTGGGTCGAGTTCGTGTACTGGCTTTAGTGGTGAAGCTTTTTTCTGTATCTAGGTCAGCAGCATCTACCATTTACAGTTTAAATCTGCTTAAATTGTTGGAAGCAGAAATCAGAAATGCAGATGATACCCTCGTAACTTTAAGTGTTTTGGAGCTTCTATATGAGTTAGCAGAGATTGAACATGGTACAGAATTTTTGTCAAAGACTAGCCTCTTTCAATTGCTTTTGTCGATAATTAGTAACAATTCTATGGAATCAATTTTAAGATCAAGAGCAATGATGATAAATGGAAGGCTACTGTCCAAGGACATGACATACGCCTTCCTAGATGAACCTTGTGTTAAAGCTGTTATTTCATCTATTGATGGTAGACTTCAGTCGTTGGAACCTTCAGATACAGATGAGTCTGAAACTGCACTTGAATCCTTGGGTCATATGGGATCATCCATCCAAGGAGCTACATTGCTACTCTCTGGTTCATCACCTGCTGCTAGACATGTCATAGATGCCGCTTTTGATCGACAAGGACCACAAGGGCATGGTAGACAGCTGGCTGCATTGCATGCTCTTGGAAACATCTCGGGAGAAACCAGATCTGAGAATAACATCGTACTCAATGCTGAAGCAGAAGAAAACCTGCGACGCCTAATTTATGAAACAGCATCCAGAAGCTCAAAGCTGACACCATCGGGTCTTTTTCTGTCAGTTTTGCAGCAGAATTCAGAAATACGTCTAGCGGGCTATAGAATGATAAGTGGATTGGTAGCCCGACCGTGGTGCTTGATGGAGATATGCTCAAAACAAGAGATTATAAATAAAGTGACCGACCCAAGTTCTGAAACCACAAAAATAGGTATGGAAGCCAGATATAACTGCTGCAAGGCGATACACAAATCATTGACACACACTAGTAGAGTTTCTGCTGATCCTGCTTTTGCGGGAATAGCTGCAAAGTTGCAGGAAGCTGTTGGAATGGGTCCATATCTTATTAAAAAGCATGTTGAAGCTCAACCTGTTGTGATGACGGCTGAGAGATTTTAG 1572 0.4186 MDDPSQLLEAASDFAHYPGVQSDDSTRDFLNRFPFPLIINALQTQLDVPGLENTLVACLERIFNTKLGASLIPQYMPFVQVGLQADSQAVRSLACKTVTCLLDNFDNDYKVAARLIKDFNIYPLLLDCLINGNEHVAAVAMDAIKKLAGFPEGMEIIFPSAKRGDTDLGIIASQCSSLGRVRVLALVVKLFSVSRSAASTIYSLNLLKLLEAEIRNADDTLVTLSVLELLYELAEIEHGTEFLSKTSLFQLLLSIISNNSMESILRSRAMMINGRLLSKDMTYAFLDEPCVKAVISSIDGRLQSLEPSDTDESETALESLGHMGSSIQGATLLLSGSSPAARHVIDAAFDRQGPQGHGRQLAALHALGNISGETRSENNIVLNAEAEENLRRLIYETASRSSKLTPSGLFLSVLQQNSEIRLAGYRMISGLVARPWCLMEICSKQEIINKVTDPSSETTKIGMEARYNCCKAIHKSLTHTSRVSADPAFAGIAAKLQEAVGMGPYLIKKHVEAQPVVMTAERF 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1752 523 Gene3D - 2 403 IPR011989 -
Ssu3g1752 523 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 5-RELATED 3 523 IPR019538 GO:0043248
Ssu3g1752 523 SUPERFAMILY ARM repeat 76 481 IPR016024 -
Ssu3g1752 523 Pfam Proteasome non-ATPase 26S subunit 58 511 IPR019538 GO:0043248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1752 K06692 - gmx:100785671 908.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g1752 3 53530074 53569994 Ssu3g1752 3 53530074 53569994 ECH