Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1748 ATGTTACACTCTCACCATCACCACCTTCTCTTCTCTACCCTCCCTGTTCCCCTCTCACTCACCCATCACCACCCTTCAccatctcttcattttctccaCAGACCCACCACCACAACCGTTTCAGCCATTCCTCCAGCATGGCTAGCACAACTCACAACACAAGACTTAGGCCCCATTGAACTCCCTTTTTCTATTCCTATTTCCCTTCTCACAGTTGACCCTTCTACCATTCAGGTTGCTTCCAGTGTCCTTCTCTCCGGAGCCATCACTGTCTTCTTCTTTCGCTCTGTCCAGCGCCGGGCAAAACGTGCCAAAGAATTGAAATTTAGGTCTTCAGGAGTGAAGAAGTCATTGGACTGCTTGAAAGCTATGAGGTCAAGTTCCATCAAAGCTAAGAGTCCACCTTCACCTGATCAAGCATTGTTAGGAGCAGTTATAGCAGGTGTTATTGCTGTTGTTCTCTACAGGTTCACCACATCTATTGAGGCTACTCTCGGTCGCCAAACACTTTCAGATAATTTCTCAGTTCGTCAGATAACAATCACCATAAGGACAATAATAAATGGCTTGTGCTACCTTGCTACATTTGTCTATGGCATCAACTCTGTTGGTTTATTTCTTTATTCTGGCCAGCTTGCCATGGACTCCGTTGTGGGAGGGTCAAGTGGAAAGGAATCTGAAAGCAAAATCATTGAGAAGTCAAGCTTATCAAATGCATCAGTTGAGAATCtcacaaataataaattgagcAGCACAAAGGAAGatcaaagttcaaataattCACTATAA 789 0.4195 MLHSHHHHLLFSTLPVPLSLTHHHPSPSLHFLHRPTTTTVSAIPPAWLAQLTTQDLGPIELPFSIPISLLTVDPSTIQVASSVLLSGAITVFFFRSVQRRAKRAKELKFRSSGVKKSLDCLKAMRSSSIKAKSPPSPDQALLGAVIAGVIAVVLYRFTTSIEATLGRQTLSDNFSVRQITITIRTIINGLCYLATFVYGINSVGLFLYSGQLAMDSVVGGSSGKESESKIIEKSSLSNASVENLTNNKLSSTKEDQSSNNSL 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1748 262 MobiDBLite consensus disorder prediction 235 262 - -
Ssu3g1748 262 PANTHER OS02G0307800 PROTEIN 10 259 - -
Ssu3g1748 262 Pfam Protein of unknown function (DUF3082) 135 212 IPR021434 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1748 Ssu-Chr3 53322883 53325423 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1748 - - gmx:100783357 353.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g1748 3 53322883 53325423 Ssu3g1748 3 53322883 53325423 ECH