Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1726 ATGGATTTGAGAATTCAACGTATAAACTGGGTGGGGAATATTTACCAGAAGTTTGAAGCAGTGTGCCAGGAGGTGGATGATATTGTAGGCCAGGATGCAGTTAAATATCTTGAGAATCAAGTCCAGAATGTTGGAGACAGTGTGAAAAAGTTCTATTCTGGAGTTGTACATGAGCTACTTCCTTTTCCTAACTTGGCCAGTTCAAAATATGAACCTCATTCAGTAGCTTTGACAAATAACATTGGCTTTTCAGCTGAGTCAGTTGCTGGtcataaagataataatgaaaaaagggATGAGGAAAATcccatcaataattttattaagtcattacaGGATTCTAATGCCATTGATATAGCTAATAATCAGCAAGCTGGTGTTCCTATCAAGCACAACCTTGCAAATCAAGTTAGTGATGAAACTTGCTCAGATTCCCTGGAGGTGGAAGATTCTTACATAACTCAGGAAGAGGTTGGTGATGACTCAAGAGAAACTTCAGTGGCTGAGGAAGAAAACTTGTGTACAATCATTGAAGAGGTTGCTGTCGAGTCTGTGCCTAAACCGATGAACATGATATCTATTACAGAGAAAGAACCCTTTGAATTCCCTATACACAGTGAATCCTATTCTGGTTCTTCTGACAGTGGATGTGGAGTTTCAATCAGAACAAAGGATAACATAGATGTGAATGTGGAACAAAACTCATGTTTGGTTGTTGAAGAAAATGCTATAAATTCATCCACGTCCCAAGTGTTGAGTTCCCAGTCTCTTGAAGAGGAAGAATCAATTAAAGTCTCCTTGCTCAGTGAATCATCTGATGTTGATGAGAATACACATGGTATACTAGCTGAAGTTTCACCTGATGCTTATGTGTCAAGCAAAAGGCCTCTCACAAAGACTGAACCTTTATGCTTCGAAAGTTCCTTAACTTCTGACAGTTTATATTCAAAATCACTGGGAAGCCACTCCTTTGAAATTGAATCTTGCAAAAACAATTCAGGTGACGCTACTCTGTGTATTTCAGATAGTTCCACAATACATTTATGTTGTGAATCATCCCCCCATGTAGCTGGTCGGGTCATGGAATCCCATGATGGACTTGTTTTCTCTGGCTACTGTCAATCTATGGAATCAAATGATAAATCACTGGTCAGTTCTATTGAATCCAGCTTGGAAGACATTCAATTGAATGATGATCCAAAGCTTGAGGAAAGCTGTGTATTTGTGGACGATAGTGAACTCTATGCAGTCTCCTGTAGAGCCCAAAAGCTTAGATCATATAAGAAAAGAATCCAGGACGCATTTGCTTCAAAGAAGAGGTTAGCAAAGGAGTATGAGCAGCTAGCGATATGGTATGGAGACACCGATATTGAGCCCAATCAAGGTTTTTCACAAACTTTATTGCCATTTAGCTCCAGAACGTATATGGACTCAAAGAATGTGCAAGTTCAGCATGCTTCTGAAACTGAGTGGGAGCTGCTGTAA 1485 0.3852 MDLRIQRINWVGNIYQKFEAVCQEVDDIVGQDAVKYLENQVQNVGDSVKKFYSGVVHELLPFPNLASSKYEPHSVALTNNIGFSAESVAGHKDNNEKRDEENPINNFIKSLQDSNAIDIANNQQAGVPIKHNLANQVSDETCSDSLEVEDSYITQEEVGDDSRETSVAEEENLCTIIEEVAVESVPKPMNMISITEKEPFEFPIHSESYSGSSDSGCGVSIRTKDNIDVNVEQNSCLVVEENAINSSTSQVLSSQSLEEEESIKVSLLSESSDVDENTHGILAEVSPDAYVSSKRPLTKTEPLCFESSLTSDSLYSKSLGSHSFEIESCKNNSGDATLCISDSSTIHLCCESSPHVAGRVMESHDGLVFSGYCQSMESNDKSLVSSIESSLEDIQLNDDPKLEESCVFVDDSELYAVSCRAQKLRSYKKRIQDAFASKKRLAKEYEQLAIWYGDTDIEPNQGFSQTLLPFSSRTYMDSKNVQVQHASETEWELL 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1726 494 Coils Coil 424 444 - -
Ssu3g1726 494 PANTHER BNAA05G11610D PROTEIN 164 494 - -
Ssu3g1726 494 PANTHER BNAA05G11610D PROTEIN 1 171 - -
Ssu3g1726 494 PANTHER F3N23.33 PROTEIN 164 494 - -
Ssu3g1726 494 PANTHER F3N23.33 PROTEIN 1 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1726 Ssu-Chr3 52337406 52340619 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1726 - - gmx:100803672 779.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g1726 3 52337406 52340619 Ssu3g1726 3 52337406 52340619 ECH