Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1716 ATGCCTTCTTCCCCCAAGTCCTACGCCTCCTCCTACGCTCGCCAACCCACGCTCTTCACCACTCGCAGATCCGCCCTCTACCTCTTCCTCACCGcgctcttcctcttcctcttcttcggAACCGTCGCGTTCCTCCGGCAGATTGGCTCCGACCGCTGCGTGAACGCGCACCCCCGATCGGTGCGCGTGGTTTGGGAACACGCCGGAAGCAGCGGCGGCGCCGGCGATGGGGACAGGCATAAGGTGATGGGGTTTGTGGGCATTCAAACCGGGTTCGGATCCGCTGGGAGGAGAGAGGCGTTGAGGAAGACGTGGTTCCCTTCTGATCGCCAGGGCCTTCAACGCTTGGAAGAAGCCACTGGGTTGGCTTTTAGGTTTATCATTGGTAGAACAAGTGATAGAGCAAAGATGTCTGTGCTTCAGAAGGAAGTAGCAGAATATGATGATTTCATTCAGTTGGATATCCAAGAGGAGTACAGTAAGCTCCCATACAAAACGTTAGCTTTCTTCAAAGCTGCTTATGCTCTTTTTGACGCTGAGTTTTATGTCAAAGCTGATGATGACATATATTTAAGGCCAGATCGTCTATCATTACTACTGGCCAAAGAGCGATCTCACCCTCAGACATACATAGGATGTATGAAGAAGGGACCTGTTTTCACCGATCCAAAACTCAAATGGTATGAGCCACTGTCATATTTGCTTGGAAAGGAGTATTTTCTTCATGCTTATGGTCCTATATATGTTCTTTCTGCCGATGTTGTATCAAGCTTGGTTGCTCTTAGGAATGACAGGCAAGTTTCCTTTCCTCCAGAACTTGCATTTTTCCGGATGTTCAGCAATGAGGATGTTACTATTGGAGCTTGGATGCTTGCAATGAATGTCAACCATGAGAATAATCATGAACTTTGTGCAACAGACTGTACAGCCACATCTATTGCTGTGTGGGATATTCCAAAGTGTTCAGGCCTCTGTAATCCAGAAAAGAAAATGTTGGAACTCCATCAAAAGGAGACCTGCTCTAAGAGCCCAACTCTAGAATCGGATGATGAATAG 1056 0.4688 MPSSPKSYASSYARQPTLFTTRRSALYLFLTALFLFLFFGTVAFLRQIGSDRCVNAHPRSVRVVWEHAGSSGGAGDGDRHKVMGFVGIQTGFGSAGRREALRKTWFPSDRQGLQRLEEATGLAFRFIIGRTSDRAKMSVLQKEVAEYDDFIQLDIQEEYSKLPYKTLAFFKAAYALFDAEFYVKADDDIYLRPDRLSLLLAKERSHPQTYIGCMKKGPVFTDPKLKWYEPLSYLLGKEYFLHAYGPIYVLSADVVSSLVALRNDRQVSFPPELAFFRMFSNEDVTIGAWMLAMNVNHENNHELCATDCTATSIAVWDIPKCSGLCNPEKKMLELHQKETCSKSPTLESDDE 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1716 351 PANTHER HEXOSYLTRANSFERASE 3 342 - -
Ssu3g1716 351 Gene3D - 85 327 - -
Ssu3g1716 351 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 3 342 IPR002659 GO:0006486|GO:0016020|GO:0016758
Ssu3g1716 351 Pfam Galactosyltransferase 97 300 IPR002659 GO:0006486|GO:0016020|GO:0016758
Ssu3g1716 351 SUPERFAMILY Nucleotide-diphospho-sugar transferases 165 277 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1716 Ssu-Chr3 52101334 52110774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g1716 19 351 Glycosyltransferase AT1G53290 69.883 3.47e-178 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1716 - - gmx:100775674 580.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g1716 3 52101334 52110774 Ssu3g1716 3 52101334 52110774 ECH