Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1699 ATGTACAATTATTTCCTCCCCTTCATCTATCTTTCCCCCTTCTTCTTTCACCACCCAATTTCTGCATCAAATCTCCACAAAATCAAGCAACTCACCTCAGAATTTCTTCCTGAACCCACATCTTCCGATGACCCTCCCCCACCAACTGAGTACTTTGAGGTAACCAGACCCATTGAACTCCCCAAAACAAAACCTTACTCATACCACGTTCTCCACCACGACTTTGGCTACACCTATGGCCAACCCCCAGTTCTCGCCAGCTACACCCCTCCCTCTGATTGCCCCTTTCACAGTTTCTCCAAAATTGTCCTCGAGTGGAATGCCACCTGCAAAGGAAGACAATTTGATCGCATTTTCGGTGTGTGGCTTGGCGGGGCTGAGCTTCTCAGAAGCTGCACTGCAGAACCAAGAGCCACCGGCATTGTTTGGAGTGTCCACAAGGACATCACAAGGTACCATTCTCTGCTGTTAAGTCCCCAAACCCTTGCTGTTTATTTGGGAAATCTTGTGGATAAAACCTACACTGGAGTTTACCACGTTGATATCACCATTTACTTTTACCCTTATGTGAAGTCTTTGAGCAACGATGATGGTTCAAAGTCAAAGTTTGGAGGTTCAGCATTTGGGGGTGGTGTCCCTGCTGATCTGGTCCTGCCCATTTCGAGGAACCTTCCACTGAATGATGGGTTGTGGTTTGAGATTAAGAATTCCACTGATGAGGGTTTGAAGGAGTTCAAGGTGCCCCAAAATGCCTATAGGGCTGTTTTAGAGGTGTATGTTTCATTTCATGAGAGGGATGAGTTTTGGTACACCAATCCTCCTGATGAGTATCTTATTGCCAACAACCTCAGTGGTGTGCCTGGGGGTGGATCATTTAGGGAGGTTGTGGTTACTCTTGATGGGAAGGTGGTTGGTGCAGTTTGGCCTTTTACTGTGATTTACACTGGAGGGGTTAATCCCCTCTTGTGGAGGCCTATTACTGGGATTGGATCATTTGATCTTCCGTCTTATGATATCGAGGTTACGCCGCTTTTGGGGACCTTGTTGGATGGGAAGAGCCATTCTGTGGGGTTCAGCGTGACGAACGCGTTGAATGTTTGGTTTATAGATGCAAATTTGCATCTCTGGTTGGATGGGAAGAGCAGTAAAACAGAAGGAGGACTTGTGCATCTTGTTGACAAACCTTTGGCTGTGTCTTTAGTGTCTGACTTTGAAGGTTTGAATGGATGTTTCTGGACTGGTGCAAAGAGGTCCATTTTGTCCACTGGGTGGGTCAGATCCTCCTTTGGAAATATTACAACCAGTTTTGCCCAAGATTTTGTTTACAACAATTCAATGGTGATGGGGAAGAATGGGAATGAGCAAATTGTGAATCAACTAATTCTTTTCAATGACAGTGTTAATGCTAACCTTCCATCACCCTTTGTTGATGAGACACACAGAAAATTTTCCCTATACTTGGACACAGATGAGCTGGATCAGGATGATGATACTTATCTATCTGTTTCGAATGTTACATTGGGATTTGACGAGAACAAGTCTAGGAGTTCGGCTTTTTGGATTTTCGAAGAGCTCTCTCATAAATGTGCAGGATGGCCAGGGTACTATGGTTGTCAAAGGGAATTTGGTTGTTAG 1635 0.4508 MYNYFLPFIYLSPFFFHHPISASNLHKIKQLTSEFLPEPTSSDDPPPPTEYFEVTRPIELPKTKPYSYHVLHHDFGYTYGQPPVLASYTPPSDCPFHSFSKIVLEWNATCKGRQFDRIFGVWLGGAELLRSCTAEPRATGIVWSVHKDITRYHSLLLSPQTLAVYLGNLVDKTYTGVYHVDITIYFYPYVKSLSNDDGSKSKFGGSAFGGGVPADLVLPISRNLPLNDGLWFEIKNSTDEGLKEFKVPQNAYRAVLEVYVSFHERDEFWYTNPPDEYLIANNLSGVPGGGSFREVVVTLDGKVVGAVWPFTVIYTGGVNPLLWRPITGIGSFDLPSYDIEVTPLLGTLLDGKSHSVGFSVTNALNVWFIDANLHLWLDGKSSKTEGGLVHLVDKPLAVSLVSDFEGLNGCFWTGAKRSILSTGWVRSSFGNITTSFAQDFVYNNSMVMGKNGNEQIVNQLILFNDSVNANLPSPFVDETHRKFSLYLDTDELDQDDDTYLSVSNVTLGFDENKSRSSAFWIFEELSHKCAGWPGYYGCQREFGC 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1699 544 PANTHER PEPTIDE-N4-(N-ACETYL-BETA-GLUCOSAMINYL)ASPARAGINE AMIDASE A PROTEIN 7 517 - -
Ssu3g1699 544 Pfam Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A 65 470 IPR021102 -
Ssu3g1699 544 PANTHER PEPTIDE-N4-(N-ACETYL-BETA-GLUCOSAMINYL)ASPARAGINE AMIDASE A PROTEIN 7 517 IPR021102 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1699 Ssu-Chr3 51448496 51450130 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1699 - - gmx:100783515 857.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g1699 3 51448496 51450130 Ssu3g1699 3 51448496 51450130 ECH