Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1698 atgAAAGTACAGAACACAGCAAGGACAACACTCTTCCACTACCCCATTTCTGCTTCAAGTCTCCATAAAATCAAGCAACTCACCTCAGATTTTCTCCCTGAACCCACATCTTCTAATGACAGCCCACCACTCATTGAGTACTTTGAGGTAACTAGACCCATTAAACCCCCTAAAACAAAACCTTGCTCACACCACATTCTCCACCAAAACTTTGGCTACACTTATGCTCAACCTCTAGTTCTCGCCAACTACACCCTTCCTTCTAATTGCCCCTTTCACTGTTTCTCCAAAATCATGCTTGTGTGGAAGGCCACTTACAAAGGAAGACAATTTGATCGCATTTTCGATTGGATAAAACTTACACTAGGGTTTACCATGTTGATGTTACCGTTCACTTTTACCCTTCTTGGagtaataatgataaatcaagCTCAAAGTTTTGGAGCTTTGGCATTTAAGGGTGATGTCCCTACGGATTTGGTCCTACCCATTTCACAGAACCTTCTATTGAATGATGGGTTGTGGTTTGAGATTAAAAATTCCACTAATGAGGGTTTGAAGGAGTTCAAGGTGCCCCAAAATTCCTATAGGGCTATTTTAGATGGATTAGTTTTGGTATACCAATCCATAGATGAGTATCTTATTGCCAATAACCTTAGTGGTGTGCCTAGGGGTGGTTCATTTAGGGAGGTTATGGTTTCTCTTGATAGGAAGGCTGTTGGTGCAATTTGGCCTTTTACTGTGATTTACACTAAGGGGGTTAATCCCTTCTTGTGGAGGCCTATTACTAGGATTAGCTCATTTGATCTTCCATCTTATGATATTGAGGTTACACCATTTTTGGGGATTATATTAGATAAGAAGAGCCATTCGATGGGGTTCAACATGACTAATGCGATGAATATTTGGTTTATAGATACAAATTTACATCTTCAATTTGATGGAAAgagcaataaaataaaaggaagactCGTGGATCTTGTTGACAAACCTTTGGTTATGTCTCTAGTGTCTGACTTTGAAGGAATGAATAGAAGGAGCTTTCTCAAAAATGTGCAGGATGGCCAGGCTACTATGGTTATTACAGGGAATTTGATTGTTAGGGGACTGGGTGAAACACAGTAG 1125 0.3884 MKVQNTARTTLFHYPISASSLHKIKQLTSDFLPEPTSSNDSPPLIEYFEVTRPIKPPKTKPCSHHILHQNFGYTYAQPLVLANYTLPSNCPFHCFSKIMLVWKATYKGRQFDRIFDWIKLTLGFTMLMLPFTFTLLGVIMINQAQSFGALAFKGDVPTDLVLPISQNLLLNDGLWFEIKNSTNEGLKEFKVPQNSYRAILDGLVLVYQSIDEYLIANNLSGVPRGGSFREVMVSLDRKAVGAIWPFTVIYTKGVNPFLWRPITRISSFDLPSYDIEVTPFLGIILDKKSHSMGFNMTNAMNIWFIDTNLHLQFDGKSNKIKGRLVDLVDKPLVMSLVSDFEGMNRRSFLKNVQDGQATMVITGNLIVRGLGETQ 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1698 374 PANTHER PEPTIDE-N4-(N-ACETYL-BETA-GLUCOSAMINYL)ASPARAGINE AMIDASE A PROTEIN 17 116 IPR021102 -
Ssu3g1698 374 Pfam Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A 59 115 IPR021102 -
Ssu3g1698 374 Pfam Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A 155 338 IPR021102 -
Ssu3g1698 374 PANTHER PEPTIDE-N4-(N-ACETYL-BETA-GLUCOSAMINYL)ASPARAGINE AMIDASE A 17 116 - -
Ssu3g1698 374 PANTHER PEPTIDE-N4-(N-ACETYL-BETA-GLUCOSAMINYL)ASPARAGINE AMIDASE A 155 351 - -
Ssu3g1698 374 PANTHER PEPTIDE-N4-(N-ACETYL-BETA-GLUCOSAMINYL)ASPARAGINE AMIDASE A PROTEIN 155 351 IPR021102 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1698 Ssu-Chr3 51430538 51436565 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1698 - - gmx:100783515 425.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g1698 3 51430538 51436565 Ssu3g1698 3 51430538 51436565 ECH