Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1657 ATGGCATTCTATTTCTGGTTATGTGTTCTGGCCTTTGCTGTTCCGTGGTCAGTGGCATCTCCACTGTACCATGTGCAAGGCAATGGTTGTGATTTTTCTCTGGGAAACTGGGTTGTTGATGACTCCTACTACCCTCTCTATGATGCCTCAAGAGATTGTCCCTTCATAGGGCAGGGATTTAATTGCCTCAGAAATGGTAGACCTGATCAGGAATACCTCAAGTATAGATGGAAGCCCTCTGGTTGTGATCTTCCAAGGTTTGATGGGGTGAATTTCTTGGAGAGATTCAGAGGGAAGAAGATAATGTTTGTGGGGGACTCCATAAGCAACAATATGTGGCAGTCACTCACTTGTTTACTTCACATTGCTGTCCCACAATCAAATTACGCCTTAACAACTCCAACAAAGCATCTTTCTGTGTTCTTATTTCCGGAATATGATGCTTCAATAATGTGGTTGAAAAATGGGTTTCTAGTGGATGTGGTTCATgacaaagataaaagaagaattgTGAAACTGGACTCCATTAGATCTGGGCACATGTGGAAAGGAGTAGATGTATTGATTTTCAATACATACCATTGGTGGACCCACACAGGAGAGTCTGAAACATGGGTTCAATTTCAAGTAGGCAATGAGATAATAAAAGACATGGATCCCATGGAAGCTTACAAGATTGGGTTAACCACTTGGTCTAAATGGATTGACGCCAACATTGATCCCTCAAAGACTACAGTTCTGTTCCAAGGAATTGCTGCATCCCATTCTGGGGGGAAAGGGTGTCTCAAACAAACTCACCCAGAGCAAGGACCAATGCCACCTTATCCTGGTGTAGAAATTGTGAAGAACGTTTTGAGTAGTATGTCATGTCCTGTATATTTGCTTGACATTACTTTGCTCACACAGCTGAGGATAGATGGGCACCCTTCTATATACACAGGCAAAGGCACTTCTTATGAGGACTGCAGTCACTGGTGTCTAGCTGGTGCTCCTGATACTTGGAATGAAATCTTGTATGCTGCCTTGCTTGGACATTAA 1038 0.4229 MAFYFWLCVLAFAVPWSVASPLYHVQGNGCDFSLGNWVVDDSYYPLYDASRDCPFIGQGFNCLRNGRPDQEYLKYRWKPSGCDLPRFDGVNFLERFRGKKIMFVGDSISNNMWQSLTCLLHIAVPQSNYALTTPTKHLSVFLFPEYDASIMWLKNGFLVDVVHDKDKRRIVKLDSIRSGHMWKGVDVLIFNTYHWWTHTGESETWVQFQVGNEIIKDMDPMEAYKIGLTTWSKWIDANIDPSKTTVLFQGIAASHSGGKGCLKQTHPEQGPMPPYPGVEIVKNVLSSMSCPVYLLDITLLTQLRIDGHPSIYTGKGTSYEDCSHWCLAGAPDTWNEILYAALLGH 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1657 345 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 84 340 IPR026057 GO:0016740
Ssu3g1657 345 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 5 344 IPR029962 GO:0016413
Ssu3g1657 345 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 5 344 - -
Ssu3g1657 345 Pfam PMR5 N terminal Domain 29 83 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1657 Ssu-Chr3 48272856 48275844 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1657 - - gmx:100808031 663.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g1657 3 48272856 48275844 Ssu3g1657 3 48272856 48275844 ECH