Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1654 ATGGCGCTGCTGTGTGGTTCAACTTCCGTGACTCCATTCCTTTCGCACAAGAATGTCACAGCCTCAACAAAATCTTCCCTTGTTGGCTTTCAATTGCCACTTCCAAAGCTTACATTATCTTCTTCTATTCGAACCTTTTTACCTGCAGCTTCCCGTGTACGGTGCCAACAGGAATCTAGTACCCCTGTCACAGAAGACCCACGCTTCATGTGCGTCGAACCCGAACCCCGATTCAAGGGCCCGgACATTTGGAACAAGAGCTGGTATCCAAAAGCTACTGATCATGTGAATACAGAGAAAACATGGTATGTTGTTGATGCTGCAGACAAAGTTCTTGGAAGACTAGCGTCGACAATTGCTATTCACATCCGAGGGAAAAACTTGGCAACCTACACCCCCAGTGTGGACATGGGTGCGTTTGTAATTGTGGTAAATGCATGA 441 0.4671 MALLCGSTSVTPFLSHKNVTASTKSSLVGFQLPLPKLTLSSSIRTFLPAASRVRCQQESSTPVTEDPRFMCVEPEPRFKGPDIWNKSWYPKATDHVNTEKTWYVVDAADKVLGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNA 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1654 146 PANTHER 50S RIBOSOMAL PROTEIN L13, CHLOROPLASTIC-LIKE 52 146 - -
Ssu3g1654 146 PANTHER RIBOSOMAL PROTEIN L13 52 146 IPR005822 GO:0003735|GO:0005840|GO:0006412
Ssu3g1654 146 CDD Ribosomal_L13 102 146 IPR005822 GO:0003735|GO:0005840|GO:0006412
Ssu3g1654 146 Pfam Ribosomal protein L13 100 146 IPR005822 GO:0003735|GO:0005840|GO:0006412
Ssu3g1654 146 Gene3D Ribosomal protein L13 89 146 IPR036899 GO:0003735|GO:0005840|GO:0006412
Ssu3g1654 146 SUPERFAMILY Ribosomal protein L13 96 146 IPR036899 GO:0003735|GO:0005840|GO:0006412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1654 K02871 - gmx:100305981 265.003