Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1476 ATGACCCTCAACCGCCTCCTCTCCGCGGCCCGCCGCTCCTGCCGGCGGGCCTCCGCCCTCTCCTCCCTCCGATCCCTCTCGGCGTCCCCCGCCGTGGCCCCCTCCGCCCCGTCCCCTCCAGCGCCTCCGCCCCCCACCGCCATGATCTACGACCGCGCCGCCGAGGCCGTGAAATCTAAGCTCCGCCAGTTCGAGAACCCGGACCCCCGCTTCCTCAAGCACGGGTCCCCCCGCCCCGTGCTCTCCGACCACACGCGCATCCTCGCCGCCCCCGAGACGCGCATCACCACGCTCCCCAACGGCCTCCGCGTCGCGACGGAGTCCACCCTCAGCGCGCGCACCGCCACCGTCGGCGTCTGGATAGACGCCGGCTCGCGCTTTGAGACCGAGGAGACCAACGGCACCGCGCACTTCCTGGAGCACATGATCTTCAAGGGCACGGAGCGGCGCAACGCGCGTGAGCTCGAGGAGGAGATCGAGAACATGGGAGGACACCTCAATGCCTACACCTCCAGGGAACAGACCACCTATTACGCCAAGGTTACCGACAAGGATGTCCCCCTGGCCCTCGACATCCTCGCCGACATCCTCCAGAACTCCCGATTCGACGATAACCGCATCAGCCGCGAGCGCGACGTCATTCTCAGGGAAATGGAAGAGGTTGAGGGTCAAACTGAGGAAGTGATCTTTGATCACTTGCACGCAACTGCGTTCCAGTACACTCCTCTTGGAAGAACCATTCTTGGACCTGCTCAGAACATTAAGACAATCACCAAAGCTCATTTGCAGAACTACATTCAGACACATTACACGGCTCCTAGGATGGTGATAGCTGCATCTGGAGCTGTCAAGCATGAGGATATTGTTGAGCAAGTGAAAAAATTGTTTACCAAGTTGTCAACAGATCCCACTACCACGTCTCAATTAGTTGCTAAAGAGCCGGCAATTTTTACTGGTTCTGAGGTTAGAATGCTTGATGATGATATTCCCCTTGCACAATTTGCGGTAGCTTTTGAGGGGGCATCTTGGAAGGATCCAGATTCAATTCCTCTCATGGTCATCCAAGCTATGTTGGGTTCTTGGAATAAGACAGCAGGAGGTGGAAAACACTTGGGTTCTGAGTTAGCACAGCGAGTTGGTATTAATGAAGTTGCAGAGAGCATTATGGCTTTCAACACCAATTACAAGGACACAGGTCTTTTTGGTGTTTATGCTGTTGCTAAGCCTGATTGCTTGGATGATTTGTCCTATGCAATAATGTATGAGACAACCAAGTTGGTTTATCGTGTTTCTGAAGATGATGTTACACGTGCACGTAATCAGTTGAAATCTTCGCTGCTACTACACATAGATGGAACAAGCCCAGTGGCTGAAGATATTGGCCGTCAGCTACTCACATATGGTCGAAGAATCCCGTTTGCTGAATTGTTTGCTAGAATTGATGCTGTTGATGCCAGTACAATTAAACGTGTTGCAAACCGATTTATCTATGACAaaGATGTTGCTATTGCTGCCATGGGTCCTATTCAGCGTTTGCCTGATTACAATTGGTTCAGACGCAGAACCTACTGGAACCGCTATTAG 1584 0.5354 MTLNRLLSAARRSCRRASALSSLRSLSASPAVAPSAPSPPAPPPPTAMIYDRAAEAVKSKLRQFENPDPRFLKHGSPRPVLSDHTRILAAPETRITTLPNGLRVATESTLSARTATVGVWIDAGSRFETEETNGTAHFLEHMIFKGTERRNARELEEEIENMGGHLNAYTSREQTTYYAKVTDKDVPLALDILADILQNSRFDDNRISRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKAHLQNYIQTHYTAPRMVIAASGAVKHEDIVEQVKKLFTKLSTDPTTTSQLVAKEPAIFTGSEVRMLDDDIPLAQFAVAFEGASWKDPDSIPLMVIQAMLGSWNKTAGGGKHLGSELAQRVGINEVAESIMAFNTNYKDTGLFGVYAVAKPDCLDDLSYAIMYETTKLVYRVSEDDVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDAVDASTIKRVANRFIYDKDVAIAAMGPIQRLPDYNWFRRRTYWNRY 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1476 527 SUPERFAMILY LuxS/MPP-like metallohydrolase 90 296 IPR011249 GO:0046872
Ssu3g1476 527 Coils Coil 152 172 - -
Ssu3g1476 527 Gene3D - 309 527 - -
Ssu3g1476 527 Pfam Insulinase (Peptidase family M16) 103 250 IPR011765 -
Ssu3g1476 527 MobiDBLite consensus disorder prediction 25 45 - -
Ssu3g1476 527 ProSitePatterns Insulinase family, zinc-binding region signature. 124 147 IPR001431 GO:0004222|GO:0006508
Ssu3g1476 527 PANTHER METALLOPROTEASE 32 527 - -
Ssu3g1476 527 Gene3D - 82 302 - -
Ssu3g1476 527 SUPERFAMILY LuxS/MPP-like metallohydrolase 321 517 IPR011249 GO:0046872
Ssu3g1476 527 PANTHER BNAA01G33220D PROTEIN 32 527 - -
Ssu3g1476 527 Pfam Peptidase M16 inactive domain 257 442 IPR007863 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1476 Ssu-Chr3 38659085 38664672 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1476 K17732 - gmx:100777553 932.169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g1476 3 38659085 38664672 Ssu2g0614 2 35229494 35236893 PCT