Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0917 ATGGAGCTTCTTCCAAGTCTAGTGATGATGCTTGTTCTTGTTCTGTGCTTTGAATCACTTCCTAGTGTTAGGGCTCAGTCTACGACTACTTCTCCTGGGTCTTCTTCGACAAGGGAAGAAGCAAAggctttggatgcacttctccAACAATATGCTTACAGGGCTTTGGTGAATCCAAAAACAGGTATCATTTACAGTGCAACTCATCTTCCTTCCAATTTGACTGGGATTGAGGTTGCAGCATTGAGATTAAGGAGTGGAAGTTTAAGGAGAAAAGGCTTCCAGGCATACAATGAGTTTGGAATTCCTAAGGGACTCATTGGGAATCCATATGTGGAAAGGCTTGTTTTGGTGTACCAAAATCTGGGCAATTGGTCCACCAGGTACTACCCTTTGCCTAATTATACTTATTTGGCTCCAGTGTTGGGACTACTGGCTTATGATGGTTCAAATTTGTCAGCTACAAATTTATCAGAACTAGACATAGATACATCTGATGGTCCTATATTAGTCAAGTTCAGGGATGTAAAACCAGCCCCTCATGGTGCTGTTGCaaaatgtgtttggtttgatttgCAGGGTTCTTCCAATTTCAGCAATGTAACAGGAGGCAACACATGTTCTAGTTCCCAACAGGGCCATTTCTCTATAGTTGTTAAATCCACTGCTCCTCCAGCTCCGGCACCAGTATCTCCTGCTCCTTCGGGTGCTCCTCCAAAAGGGGGGCCAGCACCAAGTGCTCAAGGAGGAGGTGAGAAGGATAATAAAACGGTGTGGATTATTGTAGGGTCTGTTGTGGGGGGACTAGCATTGTTTGTGTTGTTGTCACTTCTAGTTTTGTGGATGAGCAAGTACaaacagaagaagaaaatgCAACAGATGGAAAGGGCTGCAGAGGTGGGAGAACCTCTTCAAATGGCTTCAATTGGGGATACAAAAGCACCTGCTGCAACTGTAACAAGAACACAACCAACCCTTGAACATGAATATGCACCATGA 999 0.4194 MELLPSLVMMLVLVLCFESLPSVRAQSTTTSPGSSSTREEAKALDALLQQYAYRALVNPKTGIIYSATHLPSNLTGIEVAALRLRSGSLRRKGFQAYNEFGIPKGLIGNPYVERLVLVYQNLGNWSTRYYPLPNYTYLAPVLGLLAYDGSNLSATNLSELDIDTSDGPILVKFRDVKPAPHGAVAKCVWFDLQGSSNFSNVTGGNTCSSSQQGHFSIVVKSTAPPAPAPVSPAPSGAPPKGGPAPSAQGGGEKDNKTVWIIVGSVVGGLALFVLLSLLVLWMSKYKQKKKMQQMERAAEVGEPLQMASIGDTKAPAATVTRTQPTLEHEYAP 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0917 332 MobiDBLite consensus disorder prediction 312 332 - -
Ssu3g0917 332 MobiDBLite consensus disorder prediction 225 241 - -
Ssu3g0917 332 PANTHER EXPRESSED PROTEIN 1 332 - -
Ssu3g0917 332 MobiDBLite consensus disorder prediction 224 253 - -
Ssu3g0917 332 Pfam Protein of unknown function (DUF1191) 39 220 IPR010605 -
Ssu3g0917 332 PANTHER PROTEIN, PUTATIVE (DUF1191)-RELATED 1 332 IPR010605 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0917 Ssu-Chr3 21942625 21943623 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0917 - - gmx:100818010 489.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g0917 3 21942625 21943623 Ssu3g0917 3 21942625 21943623 ECH
Ssu3g0917 3 21942625 21943623 Ssu2g0931 2 46368889 46369833 PCT