Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0915 ATGGCTTACAGAAGAAGGCAAGGTATATCCAGGTCTTCCACCTTCAAGGAAGAATTTCATCCATCGTTGGATGATGTTAAGGATTCTGTTCATGACAATGCTTCTCCATCAATtttctcttcttcatcttcttcaacatcatcatcatcatcatctctcGCTGCTCAAGCCATCAAAGCTTCTGCTTCTCGTCGTCAACCATCTCTTTCCTTTGCTTTTGCCCCCTCCGACCATCAAAGATCCCAGAGCTTTGAGGCTTATGGAAATGGCAACTCCAGCTCCAAGTCCGGCTTCTGGGGTGTGATTGCGCAGAAAGCCAAATCAATTCTGGATGATGATAAGTCAACCCCACAACATGACACCATGCCCCAAACTCTCAAATCGCactcatttaatacttttacaGGTCCTTCTGCATCTCAGGACTCCCCTTCACAATTCAAGTCACTGTATCAATCCCTGGACTCTAATAGAAAAATGGACAATCCTAAATTTCGGAAGGGCTTGGATGCAATCACTTCATCCCTCAATCAACTAGGTGACACCTTTGAGAAGGCTTTTGAGGAAGGCCGAACAATTGTGGAGAGTAAGACAGCAGACCTGAGAACTCAAATCAGGCGAAAAGGAAATAGCTCTGGGGACACAAACCAAACTTCAGATGTGAGAAATCCACTGCAAGAAGCAGACCAGACAGAGACTCAATCTAGTCATGAAACAAAACTCAAGGCATCACGCGACGTGGCAATGGCAACAGCTGCCAAGGCAAAATTACTTCTTCGCGAGCTAAAATCCGTTAAAGCAGATTTGGCTTTTGCTAAAGCAAGGTGTGCCCaacttgaagaagaaaataagttacTCCGGGACCGGGAGGGCAGTGATAAGGGACAAAGCCGTGAAGATGATGATCTGATCAGGCATCAACTGGAGACACTTCTTGCTGAGAAGGCTCGTCTGGCGAGTGAGAATGAGACATACTCTCGGGAAAACCGTTTCTTAAGGGAGATTGTGGAATACCATCAGCTTACTATGCAGGATGTGGTGTATATAGATGAGGGCATGGAAGAAGTCACTGAAGTTTACCCTGTAGATGCCAGCGGTATCACACGGTTGCTATCTGTCTCCCCACGTTCATCATCACCGCCATCGCCTGATGAGGTTGTTCTGGCGTCACAAAGTCCACCTGTGCTGTCTAAAGAAATATTTACTGTGTCGGAAGAAGATGATAAGACAACATCAGAAGATGAGGCTCCTTCTACTGTCTCAGATTCTCAACATACAAAatga 1284 0.4315 MAYRRRQGISRSSTFKEEFHPSLDDVKDSVHDNASPSIFSSSSSSTSSSSSSLAAQAIKASASRRQPSLSFAFAPSDHQRSQSFEAYGNGNSSSKSGFWGVIAQKAKSILDDDKSTPQHDTMPQTLKSHSFNTFTGPSASQDSPSQFKSLYQSLDSNRKMDNPKFRKGLDAITSSLNQLGDTFEKAFEEGRTIVESKTADLRTQIRRKGNSSGDTNQTSDVRNPLQEADQTETQSSHETKLKASRDVAMATAAKAKLLLRELKSVKADLAFAKARCAQLEEENKLLRDREGSDKGQSREDDDLIRHQLETLLAEKARLASENETYSRENRFLREIVEYHQLTMQDVVYIDEGMEEVTEVYPVDASGITRLLSVSPRSSSPPSPDEVVLASQSPPVLSKEIFTVSEEDDKTTSEDEAPSTVSDSQHTK 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0915 427 PANTHER - 1 427 - -
Ssu3g0915 427 MobiDBLite consensus disorder prediction 10 31 - -
Ssu3g0915 427 MobiDBLite consensus disorder prediction 397 427 - -
Ssu3g0915 427 MobiDBLite consensus disorder prediction 205 232 - -
Ssu3g0915 427 MobiDBLite consensus disorder prediction 110 147 - -
Ssu3g0915 427 MobiDBLite consensus disorder prediction 119 147 - -
Ssu3g0915 427 PANTHER UNCHARACTERIZED 1 427 - -
Ssu3g0915 427 Coils Coil 255 289 - -
Ssu3g0915 427 MobiDBLite consensus disorder prediction 33 93 - -
Ssu3g0915 427 Coils Coil 308 328 - -
Ssu3g0915 427 MobiDBLite consensus disorder prediction 198 242 - -
Ssu3g0915 427 MobiDBLite consensus disorder prediction 1 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0915 Ssu-Chr3 21896138 21899895 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0915 - - gmx:100819083 637.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g0915 3 21896138 21899895 Ssu3g0915 3 21896138 21899895 ECH
Ssu3g0915 3 21896138 21899895 Ssu2g0932 2 46397274 46401952 PCT