Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0215 ATGGCTCTTTCACTCGGCAAGCTCACCATTCTCATCGGTGCAGGTATTGTTGGTTCAGTGATTGCAAAAGAAGGGCGTCTGCCAGATGTCTCTGGTCTCGTCTCCGGTGCTTTTAAGGTTGTTTTGAAGCAACTTAAAAGCAATGATTCCGCTCCAACTGTTAAAAAGCAGCCACATAATGATGCTTTGATAGCTCAGGTAAACAGCCTTCGGCAGGAACTACAACTTCTTGCTAGAGATAGATCGATCACTATTGTAAATGCAAGTGGAACAGGTGGAAGAAAATATGTAACAGTGATTGTTATTGTTGCGATAGGATATGGATACGTTTGGTGGAAGGGATGGAAGCTTCCCGATATGATGTTTGCAACAAGGCGTGGTTTGTCTGATGCTTGCACATCTATAGGTAATCGGATGGGGAAGCTTTATGAATCAATTGAgGATGCCAAGAAGAAATTATCTGCAAGAATGAACCGTCTGgataaaaatttagatgaatGTGCTGCCCTTACTGAAAGTGCCAGGGAGGATATATCTGTAATTCAACGGGAAGCAGATACGATAAGTGGAGATTTTAAGTCTGTTCGTGTTGCTGTCCATGTTCTGGaatctaaaattaaagaaatagaaGGGAAGCAGGTGGCCACAACTGAAGGAGTAAACATGTTGTGTCAATTTACCAAGAATTTGGAGAATAGCAGAACCACAGAGTATATTCAGgcATCTTCATCCAGTTCTTCCAGGCCAGCCATTGAGCTACCACCAGTTTCACCCTCTTCCAGGGGGTTGCAGTCGGGTTCCACTAGGGTATCCCTTGAGCCACCATCCGTTACGCCATCATCAAGGTCTGAATCCTTGCCACCAAAAATGTCATCTGATCTACCATCTCCATCGAATTCTGATGGATCTGACCAGGAGAGTAGTCAGGTGAATTCGAAAAGCATTCCGCCTAAAGAAGACAAAAGCAATGGATCTAGTTCTGGCTTGTTTGGGCTGAGGTTTTCTGGCGTCTATGCTCCATTTCTGACAAGAACTCGCAGTGCGACAGATGCAGTAGTACAACAAACTCGTACAAGTAGTTTACAATAA 1089 0.4279 MALSLGKLTILIGAGIVGSVIAKEGRLPDVSGLVSGAFKVVLKQLKSNDSAPTVKKQPHNDALIAQVNSLRQELQLLARDRSITIVNASGTGGRKYVTVIVIVAIGYGYVWWKGWKLPDMMFATRRGLSDACTSIGNRMGKLYESIEDAKKKLSARMNRLDKNLDECAALTESAREDISVIQREADTISGDFKSVRVAVHVLESKIKEIEGKQVATTEGVNMLCQFTKNLENSRTTEYIQASSSSSSRPAIELPPVSPSSRGLQSGSTRVSLEPPSVTPSSRSESLPPKMSSDLPSPSNSDGSDQESSQVNSKSIPPKEDKSNGSSSGLFGLRFSGVYAPFLTRTRSATDAVVQQTRTSSLQ 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0215 362 Coils Coil 143 170 - -
Ssu3g0215 362 Pfam Protein of unknown function (DUF1664) 93 213 IPR012458 -
Ssu3g0215 362 MobiDBLite consensus disorder prediction 347 362 - -
Ssu3g0215 362 Coils Coil 60 80 - -
Ssu3g0215 362 MobiDBLite consensus disorder prediction 237 330 - -
Ssu3g0215 362 MobiDBLite consensus disorder prediction 343 362 - -
Ssu3g0215 362 PANTHER TRANSCRIPTION FACTOR, PUTATIVE (DUF1664)-RELATED 1 352 - -
Ssu3g0215 362 PANTHER TRANSCRIPTION FACTOR, PUTATIVE (DUF1664)-RELATED 1 352 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0215 - - ccaj:109792990 572.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g0215 3 3819868 3828424 Ssu3g0215 3 3819868 3828424 ECH