Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0206 ATGGCACTGAGGCTAAGTAGTACTGTGCTTTCAGCTGTTGGTTCGAGGCATTCGAGGAAACCCAAGTTGAGGTTTAGAATCAGAAGTGGTGCTGCTACAGTTAGAATGGCCTTCAGTGCAACCCCTTCAACCTCCAACGTCATTGATTCCCATCTGCACGTGTGGGCTTCACCTCAAGAGgcTGTTGAATTCCCTTATTCTCCCGGACAAGAACCCACTTTACCAGGAAATGCCGATTTTTTGCTGCAGCGTATGGAGGAGGCAGGAGTAGATGGTGCACTCATTGTGCAGccaattaatcataaatttgatCATAGTTATGTCACAAGTGTTTTGAAGAAATACCCGACCAAATTTGTTGGTTGTTGCCTTGCTAATCCAGCTGATGATGGAAGTGGGCTTAAGCAATTTGAAGATCTTGTTTTGAAGgaTGGTTATTGTGCTGTTCGATTCAATCCATATTTGTGGCCACCCGGGGAAAAGATGACAAATAAAGTTGGGAAGGCAATTTTCCAAAGGGCTGGAGAACTCAATGTGCCAGTGGGCTTCTTGTGTATGAAGGGGCTCGATCTGCATATTTCTGAAATTGAGCAATTGTGCACAGAATTTCCATCAACAGTTGTATTGCTTGATCACTTGGCCTTCTGCAAACCACCATTAAACGATGACGAAGGTCTTGTCTTTTCTCAACTTTTAAATCTGTCTAGATTCCCACAAGTATATGTGAAATTTAGTGCCCTTTTTAGAGTGTCAAGTGTGCAGTTTCCTTATCTGGATTTGTCTCCTCTCTTATCCCAAGTTGTCTCTCACTTTGGTGCTAACCGTGTAATGTGGGGCAGCGATTTTCCATATGTTGTTGCTGAATGTGGTTACAAAGGAGCCAAAGAAGCAGTGCATCTTATTGGCAATGAGATCTCTTTGCCTTTATCAGATTTAGAGTGGATCATGGGGAGGACAGCTACACAACTCTTCCAAAACCAATCGACTCCAGTCAAGAATTAA 1002 0.4251 MALRLSSTVLSAVGSRHSRKPKLRFRIRSGAATVRMAFSATPSTSNVIDSHLHVWASPQEAVEFPYSPGQEPTLPGNADFLLQRMEEAGVDGALIVQPINHKFDHSYVTSVLKKYPTKFVGCCLANPADDGSGLKQFEDLVLKDGYCAVRFNPYLWPPGEKMTNKVGKAIFQRAGELNVPVGFLCMKGLDLHISEIEQLCTEFPSTVVLLDHLAFCKPPLNDDEGLVFSQLLNLSRFPQVYVKFSALFRVSSVQFPYLDLSPLLSQVVSHFGANRVMWGSDFPYVVAECGYKGAKEAVHLIGNEISLPLSDLEWIMGRTATQLFQNQSTPVKN 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0206 333 SUPERFAMILY Metallo-dependent hydrolases 46 324 IPR032466 -
Ssu3g0206 333 Gene3D - 38 328 - -
Ssu3g0206 333 Pfam Amidohydrolase 48 324 IPR006680 GO:0016787
Ssu3g0206 333 PANTHER CATALYTIC/ HYDROLASE 43 328 - -
Ssu3g0206 333 PANTHER 2-AMINO-3-CARBOXYLMUCONATE-6-SEMIALDEHYDE DECARBOXYLASE 43 328 IPR032465 GO:0016831
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0206 Ssu-Chr3 3690650 3700492 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0206 - - pvu:PHAVU_008G016700g 577.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g0206 3 3690650 3700492 Ssu3g0206 3 3690650 3700492 ECH