Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0204 ATGCAGACGAAGAACATGAACATCCCTACATACAGAACCCGTTGGGGTGGTTACAGAGCACCCTCTAAGGTGGTTTCCGTTCCTGTTCACTTCGTGGCGTCAGAGCGCGCCAGAACTGACTCTGCCACGAAGATTCAGAAGGTGTTGAGAGGGTTTCTGGTGAGGAACACGGTGAGGAAGATGGGCGCCGTGAGAGTGGAGTTGGAGCGGATTGAGAGCGAGGTAAATGTGGAGTTGGTGAagagggaagagagagagagggtgaGGGTGATTGAGACCGTCATGAACTTGCTTCTCAGGTTGGATTCTGTTAGGGTGTTGCACTACTCTGGCCTCAGGGAGTGCAGGAAGTCTCTCATCAACAAAGCTATTGCCCTTCAAGAAATGCTTGATCAGGTGGGTGGAGTTGCTGATTCTGAGGGTGTGAAGATGGAAGAGAAGGAGGGTGAGTGTGTGGGAGGAGAGAATTGTTTGGTGAAGGGAGAGGAAGGTAATGGAATGGAAGCTTTGGGGAATGGGGAGGTAGAGAATGAGGATGGTTGCATGGAAGAAGAAAGTGTTGTGTTGGGAACAAGTTTGGTTGAGGAAAAGGAGGGTGAAATTGAGTCTGAGGAGCAAGTGGAGGGTGAGGAAATTGAATGTTTGAGGAATGAGGAGATGGAAGAGGAGGATGGTGAGGGAGGAATGGGTTTTGTTGAGGAGAAACAAGAGGAGGGGGACTGTGAGGGAGGAGATGAGAAGAAGAGGGAGTTGTTGGAGAAGATGGTGGAGGACAATGAGAAGATGATGGAGATGATGGCGCAGCTGTTTCGGAGGAATGAGATGCAGACTAGACTTCTCACCTCTCTCTCGCACAGGGTGGAGCAGCTGGAGAGAGCATTCGCTTGTGAGAAGTtgaggaggaagaaaaagaaaaatgctgaTGCCATAAATAAATCGAAAAACGACCCTAAAAATGGTTGCATCTGA 969 0.4706 MQTKNMNIPTYRTRWGGYRAPSKVVSVPVHFVASERARTDSATKIQKVLRGFLVRNTVRKMGAVRVELERIESEVNVELVKREERERVRVIETVMNLLLRLDSVRVLHYSGLRECRKSLINKAIALQEMLDQVGGVADSEGVKMEEKEGECVGGENCLVKGEEGNGMEALGNGEVENEDGCMEEESVVLGTSLVEEKEGEIESEEQVEGEEIECLRNEEMEEEDGEGGMGFVEEKQEEGDCEGGDEKKRELLEKMVEDNEKMMEMMAQLFRRNEMQTRLLTSLSHRVEQLERAFACEKLRRKKKKNADAINKSKNDPKNGCI 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0204 322 Gene3D BAG domain 33 136 IPR036533 GO:0051087
Ssu3g0204 322 Pfam IQ calmodulin-binding motif 39 57 IPR000048 GO:0005515
Ssu3g0204 322 ProSiteProfiles IQ motif profile. 38 67 IPR000048 GO:0005515
Ssu3g0204 322 Coils Coil 248 293 - -
Ssu3g0204 322 MobiDBLite consensus disorder prediction 301 322 - -
Ssu3g0204 322 Pfam BAG domain 74 132 IPR003103 GO:0051087
Ssu3g0204 322 SUPERFAMILY BAG domain 63 132 IPR036533 GO:0051087
Ssu3g0204 322 PANTHER BAG DOMAIN CONTAINING PROTEIN, EXPRESSED 19 308 IPR040400 -
Ssu3g0204 322 ProSiteProfiles BAG domain profile. 67 134 IPR003103 GO:0051087
Ssu3g0204 322 SMART BAG_1 57 134 IPR003103 GO:0051087
Ssu3g0204 322 PANTHER BAG DOMAIN CONTAINING PROTEIN, EXPRESSED 19 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0204 Ssu-Chr3 3678567 3679535 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0204 - - gmx:121173982 343.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g0204 3 3678567 3679535 Ssu3g0204 3 3678567 3679535 ECH