Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0076 ATGGCAGTTGATCTTTGCTCAGAAAATTGTGgggtttcttcttcttcttcttctgtgaGTCCAAGAATCTCATTCTCCCATGACTTTTCCCAGTCTGAGGTCATTCCTGTTGAGCAACTCCCTTTTGGATCAAACTCTTCTGGCTTGAATTCCAGCATTGATTTTGATTTCTGTGTCAGTGAGAGCTTCGAGCTTGAGTCGTCTTCAGCAGATGAGCTTTTCTCGCATGGGAGGATCCTTCCCACTGAGGTCAAGAGGAAGAATGTTCCTATAAAGCAAAAGGGTCAATCAGCACCAAAAAGTACTCAATTGCCTCCTCCTCATGCTGGTGCTTCTACAAGTAAAAGCTTGAAGAAAGAGAGGCCCAAAGAAAGCAAGTATTTGAATGATGAAGTGTATGAGAAGCAAAGTTCCAAGTCCTTTTGGAGTTTCAAGAGAAGTAGTAGTTGTGGAAGTGGACATAGAAGGAGTTTTTGTCCTTTGCCACTTCTATCCAGAAGCAACTCAACTGGATCAACAACCCCAAGTGTTAAGAGGAATCCACTTTCAAAGGAGGGTGTTAACAACATTAAGCCAAATTCACAGAAACATTCTTCCACAAGGTTGACTCACTCCTTTGTGCCAAACGGTTATTATCAAAAGCCTCCATTGAATTATAAGAGTCATGGATCTTATGGTAATAACAGCGTTCGAGTCAATCCTGTCCTGAATGTTCCTCCTGCAAACCTATTTGCTTTGGCTTCAATCTTCTCCAACAATAGAGACAAGAGCAAGAGGCAGTTTTAG 786 0.4059 MAVDLCSENCGVSSSSSSVSPRISFSHDFSQSEVIPVEQLPFGSNSSGLNSSIDFDFCVSESFELESSSADELFSHGRILPTEVKRKNVPIKQKGQSAPKSTQLPPPHAGASTSKSLKKERPKESKYLNDEVYEKQSSKSFWSFKRSSSCGSGHRRSFCPLPLLSRSNSTGSTTPSVKRNPLSKEGVNNIKPNSQKHSSTRLTHSFVPNGYYQKPPLNYKSHGSYGNNSVRVNPVLNVPPANLFALASIFSNNRDKSKRQF 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0076 261 MobiDBLite consensus disorder prediction 162 206 - -
Ssu3g0076 261 MobiDBLite consensus disorder prediction 85 127 - -
Ssu3g0076 261 MobiDBLite consensus disorder prediction 161 206 - -
Ssu3g0076 261 PANTHER F1O19.11 PROTEIN 1 255 - -
Ssu3g0076 261 MobiDBLite consensus disorder prediction 94 110 - -
Ssu3g0076 261 PANTHER OS06G0675200 PROTEIN 1 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0076 Ssu-Chr3 1526268 1527053 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0076 - - gmx:100813565 371.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g0076 3 1526268 1527053 Ssu5g3369 5 83674826 83675554 ECH
Ssu3g0076 3 1526268 1527053 Ssu3g0076 3 1526268 1527053 ECH
Ssu3g0076 3 1526268 1527053 Ssu9g0555 9 25851683 25852342 ECH
Ssu7g0332 7 5686791 5687237 Ssu3g0076 3 1526268 1527053 ECH