Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g3177 ATGGGGTTGTCGGATGGCAATGTTGTGCATGTGTTGCTTGTGTCGTTCCCCGGGCAAGGGCACGTGAACCCTCTTCTGAGGCTTGGCAAGTGGCTGGCCTCAAAAGGGTTGCTGGTTACGTTTTGCACACCGGAGGCGTGGGGCAAACAGATGAGGAAAGGCAGCAATATTATATCGGAGGAGGCAGTCCCTATCGGCGAGGGGTTCCTAAGGTTCGAAAGTTTCCAAGACGGGTGGAGTGAGGATGAGCCTCGCCGCCAGTTTTTGGAAGAATATCTGCCCCAACTCGAGAAGGCTGGGAAGCAGTTCCTCCCTCCCATCATCCACCGCCACGGCCAGCAAGGCCGTCCCATCACATGCCTCATCAACAACCCTTTCATTCCATGGGTTTCTGACGTTGCCCAATCCCTGGGCCTCCCTTCCGCCATGCTTTGGGTCCAATCCTGTGCTTCCTTTTCCGCATACTATCATTACCACCGCAAACTAGCGCCTTACCCAACCGAGAGTGAGCCCCATATTGATGTTCACCTCCCGTGCATGCCTGTGTTGAAGCACGATGAAATCCCCAGCTTCCTGCATCCAAGCACTCCGGAGCCGTTCCTGAGAAAGGCAATCCTGGGACAGTTCTCCAACTTGGAGAAACCCTTTTGCATTCTGATGGACACGTTCCAGGAGCTGGAGCCCGACATCGTTGACTACATGTCAAAGATTTTCCCTATCAGGACCATTGGGCCCTTGTTCAAGGCGCCACAAACGACGGTGCGCGGTGATTTATTGAGGGCGGATGACCGCACCATGGAGTGGCTTGACTCAAAGGCAGGGTCTAGTGTGGTGTACATCTCGGTTGGCAGCGTGGTGCACTTGACGCAAGAGCAAGTGGATGAGATGGCGTACGGGGTTCTGGAGTCGGGGCTTTGTTTCCTTTGGGTGATGAAGCCGCCTCACAAAGATACCGGGAAAAAGGCCCTGGTGCTTCCAGAGGGGTTCCTGGAGAAAGCTGGGGAGAAGGGGAAAGTGGTGGAGTGGAGCCCACAGGACCAAGTTCTGGCTCACCCCTCCGTGGCTTGCTTTGTCACTCACTGTGGCTGGAACTCCTCCACGGAGGCACTCTCCTTTGGAGTGCCCCTTGTGGCCTTCCCGCAGTGGGGTGACCAAGTCATCAATGCCAAGTACTTGGTGGATGTCTTCCAGGTGGCTGTTCGAATGAGCAGGGGTGAAGCGGCCAACCAATTGATCAAGAGGGATCAGGTGAAGCGCTCTTTGTTCGAGGCAACCGCTGGAGGCATCAAGCAGAATGCCATCAAGTTCAAGGCTGCAATAGAAGCCGCGGTAGCCCAGCGCGGCTCTTCTCACCAAAATATCCAAGCATTTGTCGATGAAATTAGGAACAAGTCTGCCGCGGCTTCCGCTTCTGTTCTCAACTCACCCTCCTTTACTGGGCATGCAGATTTGCATTTGACCAAGCCCAGCGCAAGGGCCAACTGCATTGAGACGTGA 1497 0.5504 MGLSDGNVVHVLLVSFPGQGHVNPLLRLGKWLASKGLLVTFCTPEAWGKQMRKGSNIISEEAVPIGEGFLRFESFQDGWSEDEPRRQFLEEYLPQLEKAGKQFLPPIIHRHGQQGRPITCLINNPFIPWVSDVAQSLGLPSAMLWVQSCASFSAYYHYHRKLAPYPTESEPHIDVHLPCMPVLKHDEIPSFLHPSTPEPFLRKAILGQFSNLEKPFCILMDTFQELEPDIVDYMSKIFPIRTIGPLFKAPQTTVRGDLLRADDRTMEWLDSKAGSSVVYISVGSVVHLTQEQVDEMAYGVLESGLCFLWVMKPPHKDTGKKALVLPEGFLEKAGEKGKVVEWSPQDQVLAHPSVACFVTHCGWNSSTEALSFGVPLVAFPQWGDQVINAKYLVDVFQVAVRMSRGEAANQLIKRDQVKRSLFEATAGGIKQNAIKFKAAIEAAVAQRGSSHQNIQAFVDEIRNKSAAASASVLNSPSFTGHADLHLTKPSARANCIET 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g3177 498 Gene3D Glycogen Phosphorylase B; 14 454 - -
Ssu2g3177 498 ProSitePatterns UDP-glycosyltransferases signature. 342 385 IPR035595 -
Ssu2g3177 498 PANTHER UDP-GLYCOSYLTRANSFERASE 84A1 8 466 - -
Ssu2g3177 498 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 8 466 - -
Ssu2g3177 498 CDD GT1_Gtf-like 10 447 IPR002213 GO:0008194
Ssu2g3177 498 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 9 461 - -
Ssu2g3177 498 Gene3D Glycogen Phosphorylase B; 253 442 - -
Ssu2g3177 498 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 268 395 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g3177 Ssu-Chr2 94088750 94090246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g3177 7 461 Glycosyltransferase AT4G15480 53.996 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g3177 K23279 - aprc:113870335 728.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g3177 2 94088750 94090246 Ssu2g3177 2 94088750 94090246 ECH