Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g3176 ATGGCGTTTTTGGAATTCCGTAGACTGGACGAGAGGTTGGTGATAGAGTACGTAAGGGACGTCCCTGCCCTGTCGTCGAGGCTGGGTGATGATGATAACATAACCGTGAGAGAGATCGGAGATGGTAACCTCAACTTTGTGTTCGTCGTCGCCAACTCTGTGGGTTCCTTTGTCATCAAGCagGCTCTTCCGTACATTCGTTGCATTGGGGAATCATGGCCACTTACAAAGGAGAGAGCATACTTTGAGGCGATGGCGCTGGAAGAGCAGGGTCGCTTAACCCCTCAGCATGTCCCACAGCTCTATCATTTTGACCCCACCATGTCCTTGATCGCCATGCGCTACCTCCAGCCTCCCCACATCATACTCAGAAAAGCCTTGATTGCTGGAATTCAGTATCCACTCCTCGCACGCCACATGGCACATTTCATGGCAAACACTTTCTTCTTTACTTCTCTCCTTTTCCGTTCCACACTCCATCACAAAAGGGAAGTTGCCAAATTTTGCGGGAATGCCGCGTTATGCAGTCACACTCAGCAGGTTGTTTTCTCTGACCCTTATCAAATCTCTCAATACAATCATTGGACTTCTCCTTATCTTGATCCTGATGCCGAGGCTCTTCGTCAAGACAATCTCCTCAAACTTGAAGTTGCTCACCTCAAATCCACGTTCTCCGAGAGGGCCCAGGCGCTAATACATGGAGATCTACATACGAGTTCTGTGATGGTTACTCCTAATTCAACTCAAGTCATTGATCCAGAATTTGCATTTTATGGACCAATGGGTTTTGACATTGGTGCATTCTTGGGAAACTTGATGTTGGCTTTCTTTGCTCAGGACGGACTTGCTGATCAACCCAATGATCGAAGAGCATATAAGGAGTGGATTCTTCAGACAATTGAAGAGACTTGGAATCTTTTTTACGACAAATTTATTGCACTTTGGGATGAGCACAGAAATGGTGCTGGTGAGGCATATCTTCCAGCAATTTATAACAATCCTGAGGTTCAGCTTCTTGCACAGAAGAGATACATGACAGATTTGTTTCATGACAGTCTTGGATTTGGTGCTGCCAAAATGATAAGGTGA 1089 0.4601 MAFLEFRRLDERLVIEYVRDVPALSSRLGDDDNITVREIGDGNLNFVFVVANSVGSFVIKQALPYIRCIGESWPLTKERAYFEAMALEEQGRLTPQHVPQLYHFDPTMSLIAMRYLQPPHIILRKALIAGIQYPLLARHMAHFMANTFFFTSLLFRSTLHHKREVAKFCGNAALCSHTQQVVFSDPYQISQYNHWTSPYLDPDAEALRQDNLLKLEVAHLKSTFSERAQALIHGDLHTSSVMVTPNSTQVIDPEFAFYGPMGFDIGAFLGNLMLAFFAQDGLADQPNDRRAYKEWILQTIEETWNLFYDKFIALWDEHRNGAGEAYLPAIYNNPEVQLLAQKRYMTDLFHDSLGFGAAKMIR 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g3176 362 Pfam Phosphotransferase enzyme family 35 273 IPR002575 -
Ssu2g3176 362 Gene3D - 120 362 - -
Ssu2g3176 362 PANTHER METHYLTHIORIBOSE KINASE 3 362 - -
Ssu2g3176 362 PANTHER METHYLTHIORIBOSE KINASE 3 362 - -
Ssu2g3176 362 Gene3D Phosphorylase Kinase; domain 1 1 119 - -
Ssu2g3176 362 TIGRFAM MTRK: S-methyl-5-thioribose kinase 37 362 IPR009212 GO:0009086|GO:0046522
Ssu2g3176 362 SUPERFAMILY Protein kinase-like (PK-like) 8 361 IPR011009 -
Ssu2g3176 362 PIRSF MTRK 1 362 IPR009212 GO:0009086|GO:0046522
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g3176 Ssu-Chr2 94065414 94068078 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g3176 K00899 - gmx:100818359 595.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g3176 2 94065414 94068078 Ssu2g3176 2 94065414 94068078 ECH