Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g3168 ATGTCTAATCTAGTTTTCCTATCTGTGTTATTTCTCCTTCTTCAACGTCCTCTCTCATCTCTCTCAGCCAACTCTGAAGGAAACGCTCTGCATGCTTTGAGAAGCAGGCTTTCTGACCCCAACAACGTGCTGCAGAGCTGGGACCCAACTCTCGTTAATTCTTGTACTTGGTTTCATGTTACCTGCGACTCCAACAATCACGTCATTCGCTTAGACTTGGGCAATTCTAACCTCTCTGGAACTTTGGGCCCAGAACTTGCCCAGCTACCCCACCTTCAATACCTGGAGCTCTATAGGAATAACATAAGTGGGAAGATTCCTAAGGAACTTGGTAACTTGAAGAACCTTATTAGTATGGATTTGTATGATAACCAATTGGAAGGGAAAATCCCAAAGTCATTTGGCAAGTTGAAGTCACTTAAATACCTACGGCTAAACAACAACAAGCTGACAGGATCAATCCCAAGAGAGCTCACTCATCTTAAAAACCTCAAAATCTTTGATGTTTCTAATAATGATCTCTGTGGAACAATACCAGTAGATGGCAACTTTGAATCCTTCCCGATGGAAAGTTTTGAGAATAACAAATTCAGCGGCCCAGAGCTGAAAGGATTGGTTCCTTATGATTTTGGATGCTGA 639 0.4225 MSNLVFLSVLFLLLQRPLSSLSANSEGNALHALRSRLSDPNNVLQSWDPTLVNSCTWFHVTCDSNNHVIRLDLGNSNLSGTLGPELAQLPHLQYLELYRNNISGKIPKELGNLKNLISMDLYDNQLEGKIPKSFGKLKSLKYLRLNNNKLTGSIPRELTHLKNLKIFDVSNNDLCGTIPVDGNFESFPMESFENNKFSGPELKGLVPYDFGC 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g3168 212 Pfam Leucine rich repeat N-terminal domain 23 63 IPR013210 -
Ssu2g3168 212 PANTHER LRR AMINO-TERMINAL DOMAIN PROTEIN 6 209 - -
Ssu2g3168 212 Gene3D Ribonuclease Inhibitor 22 203 IPR032675 -
Ssu2g3168 212 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 6 209 - -
Ssu2g3168 212 SUPERFAMILY L domain-like 24 200 - -
Ssu2g3168 212 Pfam Leucine rich repeat 119 174 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g3168 Ssu-Chr2 93942655 93944901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g3168 2 200 Receptor kinase-like Gene Family AT1G71830 59.701 1.48e-70 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g3168 - - gmx:100812510 381.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g3168 2 93942655 93944901 Ssu2g3168 2 93942655 93944901 ECH