Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g3138 ATGCAAAAACGTTTCCACAGTCCCTCTACTATCAGAAGCCGACCCACACCCTCACTCCCTCGCCGCGTCCTTCGATTTCTCCAAACCCCAAATCCTGAAGGCCTCGAAGAAACCCCTCATCAAGATCTCCGTCTACAAGGGCCCCACCACTCCCACGTGCCTCTTCAACTCCGCAAAACTGTTGGGCAAGATTTCCATACCCCTCGATCTCACCTTGGTCGAGTCGCGCCCCTGCATGTTCCACAACGGTTGGGTCGGCCTTTCCAAAAACAGAAACCCGGCCCAGGCCAAGGCCATGGCCCAGTTATTGCACTTAACAGTCCGTGCCGAGCCCGACCCAAGGTTCGTCTTCCGGTTCGACGGCGAACCGGAGTGCAGCCCGCAGGTTTTCCAAGTGAGAGGCGACGTGAAGCAACCGGTTTTCACTTGCAAGTTCAGCTTCAGGGACAAGAACCCGGTCCAGTTCAATTCGACGAACGCGAACCATTCGGCCGAGCGAAAAGGGTGGTCCATCACCGTACACGACCTGTCCGGCTCGCCGGTCGCGGCGGCGTCCATGGTCACGCCGTTCGTTCCTTCCCCCGGTTCACAGCGGGTCAGCCGGTCCAACCCGGGGGCCTGGCTCATAATCCGGCCCGACGGAGATGGCACGTGGAAGCCCTGGGGCCGCCTCGAGGCCTGGCGCGAGCCAACAACTCCAACGCCGTCGGGTACCGCTTCGAGGTCCTCCCGGCGACCGCCGATCCCGTCACACTCGCCGGCTCCACCATTAGCTCCCAGTACGGCGGGAAATTCACCATCGACGCTACCTCCGGCGTCACTCCGGTGAACACCCCGCACGGGAGCTGGGATCTCGGGTCCGTGTCCGGTTCGGATTTCGGGTTCGAACCGCAATTGCTTTATAAGGGGTTTGTGATGTCGGCGACGTTGGACGGTGAGCGAAAGTGTAGCAAGCCCGAAGTGGAGGTGGGGGTGCAGCACGTGACTTGCACGGAGGATGCTGCGGCCTTCGTTGCTCTCGCCGCGGCCTTGGATTTGAGCATGGACGCTTGCAAGTTGTTCTCTCACAAACTCCGAAAGGAGTTGAGGCAGTAG 1095 0.6055 MQKRFHSPSTIRSRPTPSLPRRVLRFLQTPNPEGLEETPHQDLRLQGPHHSHVPLQLRKTVGQDFHTPRSHLGRVAPLHVPQRLGRPFQKQKPGPGQGHGPVIALNSPCRARPKVRLPVRRRTGVQPAGFPSERRREATGFHLQVQLQGQEPGPVQFDEREPFGRAKRVVHHRTRPVRLAGRGGVHGHAVRSFPRFTAGQPVQPGGLAHNPARRRWHVEALGPPRGLARANNSNAVGYRFEVLPATADPVTLAGSTISSQYGGKFTIDATSGVTPVNTPHGSWDLGSVSGSDFGFEPQLLYKGFVMSATLDGERKCSKPEVEVGVQHVTCTEDAAAFVALAAALDLSMDACKLFSHKLRKELRQ 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g3138 364 MobiDBLite consensus disorder prediction 88 109 - -
Ssu2g3138 364 Pfam Protein of unknown function (DUF1005) 231 363 IPR010410 -
Ssu2g3138 364 MobiDBLite consensus disorder prediction 1 21 - -
Ssu2g3138 364 MobiDBLite consensus disorder prediction 1 16 - -
Ssu2g3138 364 PANTHER F2J10.8 PROTEIN 231 364 - -
Ssu2g3138 364 PANTHER OS08G0163500 PROTEIN 231 364 IPR010410 -
Ssu2g3138 364 MobiDBLite consensus disorder prediction 30 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g3138 Ssu-Chr2 93479456 93480550 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g3138 - - var:108320824 225.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g3138 2 93479456 93480550 Ssu2g3138 2 93479456 93480550 ECH