Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2959 ATGGGATGTGAGTGTAAGAGAAAGATAATGAGTATGAGTGTGAGTGTTGTTGTGTACCTTATATCTACTGTGCTACTATCTTCCATATTCGGAGATTCAAGATCACTCTTCCAATTCCGAGATTCTCCTCCTCCTCAACAAGAAGAAGAACCGAGTCCCTCAAATGCaccttcttcttcatcatcatctcctcttcctctagcGCCGGCTTTGTTCGTCATCGGAGACTCCTCCGTGGATTGTGGAACCAACAATTTTCTGGGCACCTTTGCACGCGCCGATCACTTTCCTTACGGAAGAGATTTCGACACCCACCAACCCACCGGAAGATTCTCCAACGGAAGAATCCCCGTCGATTTTCTTGCTCTGCGTCTTGGGCTTCCTTTTGTGCCCAGTTATCTTGGGCAGACAGGGGCTGTGGAGGATATGATTCAAGGGGTAAATTACGCTTCTGCTGGAGCTGGCATTATTCTCTCTAGTGGCTCTGAATTGGGTCAGCATATCTCCTTGACTCAGCAAATTCAGCAGTTTACAGACACCCTTCAACAGTTTATATTGAGCATGGGAGAGGATGCTGCAAACAATCTCATATCCAATTCtatcttttatatttctattggAATCAACGACTACATTCATTACTATTTGATCAATGTATCCAACGTGGATAATTTGTACCTACCGTGGCATTTCAACCAATTTTTAGCAACTTCACTGAGGCAAGAGATAAAGAACTTGTACAATTTAAATGTTAGGAAAGTGGTGATAACGGGACTTGCCCCTATTGGCTGTGCCCCTCACTACTTGTGGCAGTACGGTGGTGAAAACGGAAAATGTGTTGAGCAGATAAATGACATGGTCGTTGAATTTAACTTTCTCACGAGGTACATGGTTGAAAATCTTGCTGCGGAGCTCTCTGATGCCAATATCATCTTCTGTGACGTGTTTGAAGGTTCCATGGATATTTTGAAGAACCATGAACGTTATGGCTTTAACGTCACGAACGAGGCCTGCTGTGGATTGGGGAAATACAAGGGCTGGATCATGTGCTTATCACCGGAAATGGCATGCAGTAATGCCTCCAACCATATCTGGTGGGACCAGTTCCATCCAACTGATGCAGTGAATGCCATTCTGGCAGACAATGTATGGAATGGCCGGCACACTAAAATGTGCTATCCTATGAACTTGGAGGACATGGTAATTCAGATGGCAAAATGA 1221 0.4275 MGCECKRKIMSMSVSVVVYLISTVLLSSIFGDSRSLFQFRDSPPPQQEEEPSPSNAPSSSSSSPLPLAPALFVIGDSSVDCGTNNFLGTFARADHFPYGRDFDTHQPTGRFSNGRIPVDFLALRLGLPFVPSYLGQTGAVEDMIQGVNYASAGAGIILSSGSELGQHISLTQQIQQFTDTLQQFILSMGEDAANNLISNSIFYISIGINDYIHYYLINVSNVDNLYLPWHFNQFLATSLRQEIKNLYNLNVRKVVITGLAPIGCAPHYLWQYGGENGKCVEQINDMVVEFNFLTRYMVENLAAELSDANIIFCDVFEGSMDILKNHERYGFNVTNEACCGLGKYKGWIMCLSPEMACSNASNHIWWDQFHPTDAVNAILADNVWNGRHTKMCYPMNLEDMVIQMAK 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2959 406 MobiDBLite consensus disorder prediction 39 63 - -
Ssu2g2959 406 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 48 402 - -
Ssu2g2959 406 CDD SGNH_plant_lipase_like 72 387 IPR035669 -
Ssu2g2959 406 Pfam GDSL-like Lipase/Acylhydrolase 71 382 IPR001087 GO:0016788
Ssu2g2959 406 Gene3D SGNH hydrolase 66 389 IPR036514 -
Ssu2g2959 406 SUPERFAMILY SGNH hydrolase 142 385 - -
Ssu2g2959 406 PANTHER OS02G0290900 PROTEIN 48 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2959 Ssu-Chr2 91086006 91087820 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2959 35 401 Acyl Lipid Metabolism Gene Families AT4G10950 68.750 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2959 - - gmx:100788021 676.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2959 2 91086006 91087820 Ssu2g2959 2 91086006 91087820 ECH