Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2915 ATGAGTTGGTCAAAAGTTCTAAGAGTTAGGACCTTACATATAAGTTCTCCAATTCTTGCAGCAAAAAGCCCCTTCTTTTATAAATTGTTCTCAAATGTAACGAGAGAATCTAAGCAACAATATGTGACTCTTCGAATCCATGATTCTGAAGAGGCTGCCGTTATGGACCtacttaattttatgtataGTAATACTTTATCAAGAACGACATCTGTTGCTGTATTGGATGTGCTGATGGCTGCTGATAAATTTGAGGTTGCGTCATGCATAAGGTATTGCAGTAGGATGTTGAGGGAAATGCCTATGAGTTGTGAGTCTGCCTTACTTTATTTGGATCTTCCTTCAAGCATTTTGACGTCAGATGCAATTCAACCACTGATAGAGACAGCAAAGTTGTTTCTTGCCACACACTACAGAGACATAACAAAGTTTGCGGCTGAAGTGCTGAATTTGCCCTTGGCTGGCATTGAAGCAGTGCTATCAAGTGATGACCTCCGGATGCCTTCAGAGGATGCTGTCTATGACTTTGTGCTCAAGTGGGCTAGGATACATTATCCAAAAATTGAGGACCGGCAAGATGTCCTGGGAACATCCCTTGGTCCACTCATCCGTTTTCCATACATGAGCTGCCGAAAACTGAAGAAGGTCTTAACATGCAACGACTTCCATCCTGACTTTGCATCGAAGGTTGTTCTTGAAGCTCTTTTCTTCAAGGCAGAGACACCATATCAACAACGATCTCTTGCTGCACAGGATGCTGGCACAACCTGCTGTCGTTTTGTGGAGCGGGCTTACAAGCACCGCCGTGTGAAGGTGGTTGAATTTGCATTGCCCCGTCCTCGGTGTGTCGTGTACCTTGAcctaaagaaagaagaatgtgCGCAATTTTTTCCTAATGCTCGAATTTATTCTCAGGCATTCCCCCTAGGGGAGCAGTGGTTTTTCTTGTCAGCTCGCTGCAATATGGACCAGCAAAACTTATCCCATTGCTTTGGCCTTTTCTTAGTAAGTCAATTCAAGGAATCAGTATCTCTTCATGTTGACTATGAATTTGCTGCTAGATCAAAATCCACTGAGGAATATATAAGCAGGTGCAAAGGAAATTATACTTTCACGGAACGCAAGGCTGTCGGGTATAGGAACCTGTTTGGTATACCATGGACTGCATTCATAGCTGACGATAGCCATTATTTCATCAAGGGATTACTTCATCTAAGGGCTGAGCTTACTATTAGACAATGA 1242 0.4211 MSWSKVLRVRTLHISSPILAAKSPFFYKLFSNVTRESKQQYVTLRIHDSEEAAVMDLLNFMYSNTLSRTTSVAVLDVLMAADKFEVASCIRYCSRMLREMPMSCESALLYLDLPSSILTSDAIQPLIETAKLFLATHYRDITKFAAEVLNLPLAGIEAVLSSDDLRMPSEDAVYDFVLKWARIHYPKIEDRQDVLGTSLGPLIRFPYMSCRKLKKVLTCNDFHPDFASKVVLEALFFKAETPYQQRSLAAQDAGTTCCRFVERAYKHRRVKVVEFALPRPRCVVYLDLKKEECAQFFPNARIYSQAFPLGEQWFFLSARCNMDQQNLSHCFGLFLVSQFKESVSLHVDYEFAARSKSTEEYISRCKGNYTFTERKAVGYRNLFGIPWTAFIADDSHYFIKGLLHLRAELTIRQ 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2915 413 Gene3D Potassium Channel Kv1.1; Chain A 5 137 IPR011333 -
Ssu2g2915 413 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN POB1 1 413 - -
Ssu2g2915 413 SMART BTB_4 6 101 IPR000210 GO:0005515
Ssu2g2915 413 Pfam BTB/POZ domain 11 99 IPR000210 GO:0005515
Ssu2g2915 413 ProSiteProfiles BTB domain profile. 1 70 IPR000210 GO:0005515
Ssu2g2915 413 PANTHER OS02G0260700 PROTEIN 1 413 IPR045890 -
Ssu2g2915 413 SUPERFAMILY POZ domain 11 98 IPR011333 -
Ssu2g2915 413 CDD BTB_POZ_ZBTB_KLHL-like 10 84 - -
Ssu2g2915 413 Pfam BTB And C-terminal Kelch 125 216 IPR011705 -
Ssu2g2915 413 SUPERFAMILY TRAF domain-like 300 411 - -
Ssu2g2915 413 Gene3D - 138 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2915 Ssu-Chr2 90485800 90487592 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2915 - - gmx:100780975 740.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2915 2 90485800 90487592 Ssu2g2915 2 90485800 90487592 ECH