Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2909 ATGTTGCTCTTCGGATTCCTCACGCTTCAAGACTCTTTTCCAGCACTTGCTGCTTCCGACTTTTCCAGTGGTTTAAGTTCATTTCCTATATTTGGGGATATTGGTGACATAAGCAGAGGTTTTGCTTCAGCGTTTCTGCtaatatttttctctgaatTGGGAGATAAGACCTTTTTCATTGCAGCGCTGCTTGCAGCTAGGAATTCAGCTGGTGTTGTTTTTATTGGGACATTTGGCGCACTTGCGGCAATGACTCTGATATGTGTTGTCCTTGGACGAacttttcattatgttgatgaaATCTTGCCGTTCagGTTTGGAGAAACTGATTTACCTATCGATGATATTGCTGCTGTTTGCCTATTGGTGTACTTTGGGGTCTCTACCCTGCTGGATGCCTCATCTAATGATGGCCAAAAATCAGATGAAGAGCAGAAGGAGGCAGAGCTAGCAGTTTCTGAATTTTCTGGAAATGGTGCTGGGATACTATCTGCTGCTAGCACACTTGTCAGTACTTTTCTCTTAGTTTTTGTTGCTGAATGGGGTGATAAATCATTTTTCTCCACAATTGCCCTTGCAGCAGCTTCTTCTCCCCTTGGAGTCATAGCTGGAGCACTAGCCGGTCATGGTGTTGCAACTTTGCTAGCTGTACTTGGGGGCTCTTTACTAGGGACGTTTTTGTCAGAGAAGGTTATTGCGTACATTGGAGGTGTTCTCTTTCTCGTCTTTGCTGCAGTAACCCTGTTTGAAATTGTGCAATAG 762 0.4252 MLLFGFLTLQDSFPALAASDFSSGLSSFPIFGDIGDISRGFASAFLLIFFSELGDKTFFIAALLAARNSAGVVFIGTFGALAAMTLICVVLGRTFHYVDEILPFRFGETDLPIDDIAAVCLLVYFGVSTLLDASSNDGQKSDEEQKEAELAVSEFSGNGAGILSAASTLVSTFLLVFVAEWGDKSFFSTIALAAASSPLGVIAGALAGHGVATLLAVLGGSLLGTFLSEKVIAYIGGVLFLVFAAVTLFEIVQ 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2909 253 Pfam Uncharacterized protein family UPF0016 171 244 IPR001727 -
Ssu2g2909 253 Pfam Uncharacterized protein family UPF0016 43 126 IPR001727 -
Ssu2g2909 253 ProSitePatterns Uncharacterized protein family UPF0016 signature. 52 61 IPR001727 -
Ssu2g2909 253 PANTHER TRANSMEMBRANE PROTEIN HTP-1 RELATED 1 253 IPR001727 -
Ssu2g2909 253 PANTHER PROTEIN PAM71, CHLOROPLASTIC 1 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2909 Ssu-Chr2 90418329 90422429 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2909 - - gmx:100809618 437.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2909 2 90418329 90422429 Ssu2g2909 2 90418329 90422429 ECH