Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2905 ATGAACAGAAAAATGGAGAGCATTGAAATTAACATTCCTACAAGTACCCCTACTAAATTAGAGCTGCATGAGACTGGCACGAAATCTGGAGCCAACAAGGCTTGGCTTCAGATTCAGAGTGTATGGGATTTTTGCAAGGAAGACACTGGCAGAGAAATATTTGCCCTCAAAGCTGGGCTAGCTGTTCTTCTTGTGTCTTTGCTTATATTATTTGAGGCCCCATACCAAGTCTTTGGGCCCAATATCGTATGGGCCATTCTCACTGCTGTCATTGTCTTTGAGGAAACCGTTGGAGCAACATTTAATCGTGGATTTAATCGAGCACTGGGAACCTTGGTGGCGGGAATCTTGGCTATTGTTGTTGCAGAGACAACGCTGTCCAGTGGCCATGTCGCTGAGCCTATTATCATTGGCCTTAGTATCTTCATGATcgCGGTCATAACGTCATACATGAAAATGTGGCCACCGCTTGTGCAGTATGAGTACGGGTTTAGGGTCGCACTGCTAACCTATTGCTTGATCATAGTTTCTGAGTATAGAATGGGTAACCCAATTAGGACTATGATCGATCGGTTGTATTCAATCGCCATTGGAGGAATAATATCAGTGTTGGTGAATGTCTCTATTTTTCCTATATGGGCTGGGGACCAGCTACATAAAGAGCTGGTAAAAAACTTCAATTCAGTGGCAGATTCACTTGAGGAATGCGTCAAGAAATATTTAGAAGATGCCTCAGAGAAGTCTAAAATCACCACGGCTAGCATAGATGCATTTCCAGACGAACCTGCTTATAAAAGATGTCAAAGCACCTTGAATTCAGGGCCAAAGCTTGAGACTCTGGCTAAATCAGCAAAATGGGAGCCACCACATGGTAGATTCATGCACATTTCATATCCATGGTCACAATATGTTACAGTTGGAGCAGTCTTGCGACACTGTGCTTATGAAGTTATGGCCCTCCATAGTATTGCACACGCTGAAATTCAGGTACCCCACAAATTGCGGGTTGTGTTTCGATCAGAAATTCAAGAGGCGTCAAACCAGGGTGCAGAACTAGTAAGGATTTTGGGAAGAGACATTAGCCGCATGAAGTGGAGTCTGAAAAACTCCCACATTAAGAGGCTTCATAGCTCTATTAAGAGGCTGCAACGTTCTATGCACTTCCAATATTCTTATCTACTCGCATCCACTTTTGAATCCCCTGTTCCTGATAACCCTTCAAAGTCCTTTGCAAACACTTCACATACGTTGTACCATTTACCGTATCAGAGGGGGATGGCAGAACAAACAGAATGTTATCATGAGATAACGAGGAAGCAATTGAAAAGGCTACATTCTTGGCCATCTAGCGAGGTGGATGCGTTTGAAGATAGTGAGAAAAGCATAAAGTTGTTACTTGGGAAGGTGAGAACCTTAGATTTAGAAAGTACCGCGACATTGTCATTGGCTAACTTCACTTCCGCGCTCGTGGAGTTTGTGGCAAGAGTTGACCATTTGATAGAGGCTGTTGATAAGCTTTCCAAGATGGCCAAGTTCAAGCCTGACTGGTTGTAG 1554 0.435 MNRKMESIEINIPTSTPTKLELHETGTKSGANKAWLQIQSVWDFCKEDTGREIFALKAGLAVLLVSLLILFEAPYQVFGPNIVWAILTAVIVFEETVGATFNRGFNRALGTLVAGILAIVVAETTLSSGHVAEPIIIGLSIFMIAVITSYMKMWPPLVQYEYGFRVALLTYCLIIVSEYRMGNPIRTMIDRLYSIAIGGIISVLVNVSIFPIWAGDQLHKELVKNFNSVADSLEECVKKYLEDASEKSKITTASIDAFPDEPAYKRCQSTLNSGPKLETLAKSAKWEPPHGRFMHISYPWSQYVTVGAVLRHCAYEVMALHSIAHAEIQVPHKLRVVFRSEIQEASNQGAELVRILGRDISRMKWSLKNSHIKRLHSSIKRLQRSMHFQYSYLLASTFESPVPDNPSKSFANTSHTLYHLPYQRGMAEQTECYHEITRKQLKRLHSWPSSEVDAFEDSEKSIKLLLGKVRTLDLESTATLSLANFTSALVEFVARVDHLIEAVDKLSKMAKFKPDWL 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2905 517 Pfam Aluminium activated malate transporter 42 507 IPR020966 GO:0015743
Ssu2g2905 517 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 1 515 - -
Ssu2g2905 517 PANTHER OS01G0221600 PROTEIN 1 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2905 Ssu-Chr2 90397455 90401639 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2905 39 513 Miscellaneous Gene Families AT3G18440 38.294 3.89e-99 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2905 - - gmx:102668657 857.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2905 2 90397455 90401639 Ssu2g2905 2 90397455 90401639 ECH