Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2899 ATGAACGGTGCTCCGAAGCACGAACGCCGGTGGGCGTCCGACACGGTGCCGGAGACGGCATTCGTCAGCGCCGCGACTTCGCCGGGAACTGAGTCCTATTCCGTCGCCGACGAGTACGTTGAGGTCACTCTCGATGTTCAAGACGACCACACCATCGTTCTCCGCGGCGTTGAGCCGGTGACCGTGATTAACGTCGACGACGGTGTAGCCACAAGCGGAAACGAAACTCCGGCGTCCTCTGCGTGGTCGCCGTCGATCAGGAGGAGCTCTCCCAGCCGGTGGCGGCAGTTCTCGCAGGAGCTGAAAGCCGAGGCGGTTGCGAAGGCGAGGCAGTTCTCGCAGGAGCTCAAGGCGGAGCTGCGGCGGTTCTCGTGGGGCCAAGGTGGATCTGAAACGGCGCTGGTGGCTCGAGATCTTAGGAAGCAGCGTCTTCAGCTTGAACGCAACCGGTCCGGTACTAAGAGAGCACTCCGtggactgaaatttattagcaCCAAATCCAATGGCGTTGATGCCTGGAACGACGTGCAAAGCAATTTCGATAGTCTTGCCAAACACGGTTATCTCTATCGCACCGATTTTGCGCAATGCATAGgtATGAAGGATTCCAAAGAGTTCGCTCTGGAACTGTTCGATGCTCTGAGTCGTAGACGAAGACTGAAGGTTGAAAAAATCAGCAGAGAGGAGCTTAACGAATTCTGGTCGCAAATTACCGATGAAAGCTTTGATTCGCGGCTCCAGATCTTCTTCGACATGTTGGACAAGAATGAAGATGGTAGAATCACCGAAGAAGAAGTGAAAGAGATCATTATGCTAAGCGCTTCAGCAAATAAGTTATCCAGGTTGAAAGAGCAGGCCGAAGAATACGCAGCTCTGATCATGGAAGAGTTAGACCCTGAAAGACTTGGCTACATTGAGCTATGGCAATTGGAGACACTTCTGTTACAAAAGGACACGTATCTCAGTTACAGCCAAGCGCTAAGCTACACCAGTCAAGCTTTGAGCCAGAACCTACAAGGACTAAGGGCGAGAAGTCCATACGGAGGATGA 1050 0.5229 MNGAPKHERRWASDTVPETAFVSAATSPGTESYSVADEYVEVTLDVQDDHTIVLRGVEPVTVINVDDGVATSGNETPASSAWSPSIRRSSPSRWRQFSQELKAEAVAKARQFSQELKAELRRFSWGQGGSETALVARDLRKQRLQLERNRSGTKRALRGLKFISTKSNGVDAWNDVQSNFDSLAKHGYLYRTDFAQCIGMKDSKEFALELFDALSRRRRLKVEKISREELNEFWSQITDESFDSRLQIFFDMLDKNEDGRITEEEVKEIIMLSASANKLSRLKEQAEEYAALIMEELDPERLGYIELWQLETLLLQKDTYLSYSQALSYTSQALSQNLQGLRARSPYGG 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2899 349 Coils Coil 272 292 - -
Ssu2g2899 349 CDD EFh 224 271 IPR002048 GO:0005509
Ssu2g2899 349 ProSiteProfiles EF-hand calcium-binding domain profile. 241 276 IPR002048 GO:0005509
Ssu2g2899 349 Gene3D - 146 262 - -
Ssu2g2899 349 PANTHER RESPIRATORY BURST OXIDASE2 27 341 - -
Ssu2g2899 349 PANTHER NADPH OXIDASE 27 341 - -
Ssu2g2899 349 SUPERFAMILY EF-hand 174 321 IPR011992 -
Ssu2g2899 349 Coils Coil 136 156 - -
Ssu2g2899 349 ProSitePatterns EF-hand calcium-binding domain. 254 266 IPR018247 -
Ssu2g2899 349 Pfam Respiratory burst NADPH oxidase 145 244 IPR013623 GO:0004601|GO:0050664
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2899 Ssu-Chr2 90304357 90310305 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2899 9 345 Miscellaneous Gene Families AT1G64060 70.330 2.56e-163 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2899 K13447 - gmx:100805517 613.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2899 2 90304357 90310305 Ssu2g2899 2 90304357 90310305 ECH