Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2896 ATGAACACTTCGTCGGCGTTGCAATTGCCATTCCCAGCGGATACGTCGCCGTCTGCGGTGAACATGTTTAGAATCAACAAAGTTGCGGACCGTTTGGCTTGGCTTGCTCAACCTGGCAACCGAGGCGACCACCCTTACGAATTTTATAACCTCTGTCTCTCCCTCTCTCgAGGCATTGATTATGCACTTGCCAATGGCGAAACTCCAGCCAAAGCTCATGAGCTGCCTGTACTGATGAAACAGATTTTTCAGCTGAAGAATGATGAATTATCACAAGCAGCTACGATGGTGTTGATGATATCTCTAAAGAATGCCTGTGAAATTGGATGGTTCCAAACAAAAGAGTCAGAAGAACTTCTTACTATTGCTAACGAGATAGGAAAGGTCTACGGCAGCGCAGGGAGTATAAATGCTGGACCCAGTTCTTGCAGTTCTGCAATATTAACAATAATGGAGAAGTTCTATCCAAAGAGGAAAATAGGTCCAATACTTGCGTCAATTGATGTCAAGCCAGGATATGGAGCTTTTGCTGTTGACTTCCATATTACGAAGAATAAAGTTCTAAAGGACAAAATTTATTTGTTGGTGGCACAAACAGATAACATTGAGACATCGGCATGCCTCATAAGTCCTCAGCAAGTGAATTTTCTCCTCAATGGAAAAGGAGTAGTCAATAGAACTAATGTTCAAATGGATCCTGGACCACAAATGCCAACTAATGTGACTGGCATGCTTAAATTTGGGACAAATCTTCTTCAAGCTGTGGGCCAGTTCAATGGTCATTATGTTGTACTTGTTGCCTATATGAGTGTTACACCTTTGCCTGAGCTTCTAGTTCTTCAAGATTATTTGCAGCCTGCTGTCACCTCTGTTGATTCAGattCGGATATTATCGAGGGGGCTTCGCAAATTTCACTTAATTGTCCAATAAGCTTTACACGTATCAAGACTCCTGTTAAAGGGCATTCATGCAAACATTTCCAGTGTTTTGACTTTGACAACTTCATTAATATGAATTCAAAAAGGCCATCCTGGCGCTGCCCTCATTGCAATCAGTATGTCTGTTATGCAGATATTCGTCGTGACCGAAACATGGTTGAGatcctGAAAAATGTTGGTGAAAACATTACGGAAGTGATTGTCCTTGGTGATGGATCATGGAAGGCAGTCTTGGAAAAGGATCATGATGTGGATAAGATGCCGAATAAGGCCCCCAAttgtgaaaaggaaaaatctgaACCACAAGAATCTACTCGCTCTCCTACTACAGTTGACCTCACCAAAGATGATGATCGTTTGGAGACATTGGACTCTTGTGAAATTGCAGATAGAAAACCTTTCCAGGCATCTGTTCATAGTCAGTTTGTCACCCCAAGTTCAGCTTCCCTGGGTATGAACTCTGCTGGTGTTAATCAAAATGTTGCTGCTCAAATTGAAGATGCCTTTTGGTCAGGAGTTTGTCTTCCCCGTGGTAGGTCTGAAACCCCAACGGTTGGTGTCTCTGAGCTACCTGTTCTGCCTGATACTGTTTCTCCTGCATTTAATCCGGAATCTGCAGGTTGTGACAATAACCCTGCTGTTGCCATGCATAATCAATTTTCGGCACCAAACAATCTGCAGATGCAGTTGAATCATATGAATTCAGTTAATGAGTATGGTAGGTCATCCTCAGTGCCAAGAATTAATAGGACTCCAGTAGCTGTTCAGGCCCTTCCAGTCCAATCTCGGGCATTGGGACCACAGCAaaattcaataactaatttGAATAATTCCTTGCTACCTAGCAATTCCTCTGCTACTCCTCATATTTCTTTGTCCAACCCAACCTCTGTAGATACTTTCAATGCCATACTGAGTGATACGGAAAGACAGCAACATTTTTCTCGATCCCCAAATCTGCCTCAGGTCTCAGGTGTAAATTCACCTGCATTTCAGCACCACACTGCAACACAGAATCGGGTACCACTAATGAATACGTCAGCACCAACTCAATTGCAGAACCCATACAGACCTGGTTCATTGTCTGAAATGAGAAATCCGCACCTGCAGCAAGCTCTGAATCCCCGGCCACCACCGATGCGATCATCGAATACCCAATGGTCCCAAATCCAGCAAGGTGTTCCACAATCTGGGATTTTACAGGCAGCCATGGCTACTGCAAATAACCCACAAGCCAGAGTTATGGGTGCCGCGCTGGCTGCCAGACAAGGTAGTTCCCAAGGTAGGATGATTCCGACAGCTGGAGCCACTACACATAGCCATCAAGCTAGGGGTATGGTTCCTACCCCGCCTGCCAGACAGTCATTGTCAGTTTCAGTTCAAAATCAAAGTACCGTAGCAGAACAAAGAGGAAAGACAGCAGAGTCAGTTTCTAGGCCTGAAGAATTATTCAGTTTGCAATCAGAACAGAATTGGGTTCCCACTGGACGAATGCGTGGAAGTCTAGATTTAAGTCAGCAATACGATGATTCTATTACGCAGCAAATAATTGCGCCAACACAAGGTCCACAACCTGTCCGACGGACCAGTGGGTTGACCCAACTGGATGTGCTTACTGCAAACAATAGACATGCAAATGCTCATAATCGTACTTCGAGTAGATAG 2604 0.4366 MNTSSALQLPFPADTSPSAVNMFRINKVADRLAWLAQPGNRGDHPYEFYNLCLSLSRGIDYALANGETPAKAHELPVLMKQIFQLKNDELSQAATMVLMISLKNACEIGWFQTKESEELLTIANEIGKVYGSAGSINAGPSSCSSAILTIMEKFYPKRKIGPILASIDVKPGYGAFAVDFHITKNKVLKDKIYLLVAQTDNIETSACLISPQQVNFLLNGKGVVNRTNVQMDPGPQMPTNVTGMLKFGTNLLQAVGQFNGHYVVLVAYMSVTPLPELLVLQDYLQPAVTSVDSDSDIIEGASQISLNCPISFTRIKTPVKGHSCKHFQCFDFDNFINMNSKRPSWRCPHCNQYVCYADIRRDRNMVEILKNVGENITEVIVLGDGSWKAVLEKDHDVDKMPNKAPNCEKEKSEPQESTRSPTTVDLTKDDDRLETLDSCEIADRKPFQASVHSQFVTPSSASLGMNSAGVNQNVAAQIEDAFWSGVCLPRGRSETPTVGVSELPVLPDTVSPAFNPESAGCDNNPAVAMHNQFSAPNNLQMQLNHMNSVNEYGRSSSVPRINRTPVAVQALPVQSRALGPQQNSITNLNNSLLPSNSSATPHISLSNPTSVDTFNAILSDTERQQHFSRSPNLPQVSGVNSPAFQHHTATQNRVPLMNTSAPTQLQNPYRPGSLSEMRNPHLQQALNPRPPPMRSSNTQWSQIQQGVPQSGILQAAMATANNPQARVMGAALAARQGSSQGRMIPTAGATTHSHQARGMVPTPPARQSLSVSVQNQSTVAEQRGKTAESVSRPEELFSLQSEQNWVPTGRMRGSLDLSQQYDDSITQQIIAPTQGPQPVRRTSGLTQLDVLTANNRHANAHNRTSSR 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2896 867 SUPERFAMILY RING/U-box 304 379 - -
Ssu2g2896 867 PANTHER ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN 25 734 - -
Ssu2g2896 867 MobiDBLite consensus disorder prediction 395 430 - -
Ssu2g2896 867 Pfam MIZ/SP-RING zinc finger 304 352 IPR004181 GO:0008270
Ssu2g2896 867 ProSiteProfiles Zinc finger SP-RING-type profile. 293 374 IPR004181 GO:0008270
Ssu2g2896 867 PANTHER E4 SUMO-PROTEIN LIGASE PIAL2-LIKE 25 734 - -
Ssu2g2896 867 MobiDBLite consensus disorder prediction 395 416 - -
Ssu2g2896 867 CDD SP-RING_PIAS_like 305 352 - -
Ssu2g2896 867 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 280 389 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2896 Ssu-Chr2 90232006 90242242 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2896 K04706 - gmx:100780539 1326.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2896 2 90232006 90242242 Ssu2g2896 2 90232006 90242242 ECH