Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2879 ATGGGCATGGCTGTGCTACCTTTCCCATACTCAGGATCCCCCACTCTATCTCTTCCATTATCTCAAGAAAAACGGcttaaaaccaaaccaaattccAATACCAACACATCCTCACTAATCCAATGCTGCCACAGCCAAACAGAGCCTATAGAACTAACGAGCAATGGCCGAGCCAGATTTCCAGAGAAGAATCCTCTCATCAACCCCGCAGCTGCAGTTGCATCCTCCACAATTGTCCCACCAAGGCCTCGAAGGATAATCCTTGTTAGGCACGGAGAGAGCGAAGGAAACGTGGATGAAACCGTTTACACAAGAATACCTGATCCAAAGATATCCCTCACTGACAAAGGCAAGGCCCAGGCAGAGGAATGTGGCAACAGAATCAAGCAAATGATTCAGAAAGATGGTCACCAACACTGGCAGGTTTACTTCTACGTCTCGCCATACAGAAGGACCCTTCAAACCTTGCAGAACCTCGCTCGTCCCTTTCAACGCTCAAGAATCGCTGGCTTCAGGGAAGAGCCTCGCATTCGAGAACAAGATTTCGGGAATTTTCAAAACAGAGAAAAGATGCGAGTGGAAAAAGCGTTACGCCAGCTTTATGGTCGTTTCTTTTACCGATTTCCAGATGGAGAATCTGCCGCTGATGTATATGATAGAATCACggGATTCAGAGAAACGCTGAGAACGGATATTAATATTGGACGGTATCAACCACCTGGAGAGAAAAAAACAGACATGAACTTGGTAATCGTGTCGCACGGTCTAACACTTCGAGTTTTTCTCATGAGGTGGTACAAGTGGACGGTCCAACAGTTCGAGGGTCTCAACAACATGGGCAACGGAAATATGCTTGTCATGGAAAAGGGTTATGGTGGAAGGTATAGCTTACTGATGCATCATGATGAAGAAGAGCTAAGACGGTTTGGATTGACTGATGAAATGCTGATTGATCAGGAGTGGCATAAATTGGCAAGGCCTGCTGATCTGAATTACGATTGTCCAATGGTGAATTCCTTCTTTCCCCACCTCAGGGAAGAAAATAGCATGTGTGAACAAGGAGAGTGA 1068 0.4513 MGMAVLPFPYSGSPTLSLPLSQEKRLKTKPNSNTNTSSLIQCCHSQTEPIELTSNGRARFPEKNPLINPAAAVASSTIVPPRPRRIILVRHGESEGNVDETVYTRIPDPKISLTDKGKAQAEECGNRIKQMIQKDGHQHWQVYFYVSPYRRTLQTLQNLARPFQRSRIAGFREEPRIREQDFGNFQNREKMRVEKALRQLYGRFFYRFPDGESAADVYDRITGFRETLRTDINIGRYQPPGEKKTDMNLVIVSHGLTLRVFLMRWYKWTVQQFEGLNNMGNGNMLVMEKGYGGRYSLLMHHDEEELRRFGLTDEMLIDQEWHKLARPADLNYDCPMVNSFFPHLREENSMCEQGE 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2879 355 Gene3D - 82 318 IPR029033 -
Ssu2g2879 355 Pfam Histidine phosphatase superfamily (branch 1) 86 288 IPR013078 -
Ssu2g2879 355 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 88 97 IPR001345 GO:0003824
Ssu2g2879 355 PANTHER BROAD-RANGE ACID PHOSPHATASE DET1 25 344 - -
Ssu2g2879 355 CDD HP_PGM_like 85 288 IPR013078 -
Ssu2g2879 355 SMART PGAM_5 85 261 IPR013078 -
Ssu2g2879 355 SUPERFAMILY Phosphoglycerate mutase-like 83 302 IPR029033 -
Ssu2g2879 355 PANTHER OS06G0109000 PROTEIN 25 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2879 Ssu-Chr2 90010212 90011766 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2879 - - gmx:100800012 629.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2879 2 90010212 90011766 Ssu2g2879 2 90010212 90011766 ECH