Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2869 ATGGCTTCGGAGAAGATTTACTTGATTCTCTTATTTTCTGCTGTAATTCTGCTTCTCCGTGATGCTCCTTCTGTCATAGCTGGGGACATAGTTCACGACGACGATTCAACTCCGAAGAAGCCCGGTTGCGAAAACCAGTTCGTTCTGGTGAAAGTGCAAACCTGGGTCAATGGTGTAGAGGATGCTGAATTTGTTGGTGTGGGTGCCAGATTTGGCAAAGCCATAGTGTCTAAAGAGAAAAATGCACACCACACCCGCCTTATTCTTTCAGATCCTCGTGATTGTTGCAGTCAGCCAAAGATTAAGATTGTGGGAGATGTCATCATGGTGGATCGAGGCAACTGCACATTCACAAAAAAGGCAAATACTGCACAGAATGCTAATGCTTCAGCCATCCTCATTATTAATAaccaaaaagAGCTTTACAAGATGGTTTGCAAACCTGACGAAACTGATTTGAACATACGCATACCTGCTGTCATGCTTCCACTAGATGCAGGTACAAGGCTGGAAAAAATGCTGACGAGTACTTCATCTGTGTTTGTGCAGCTATACTCACCACTTCGACCGGCTGTTGACATGGCAGAAGTATTTCTTTGGATGATGGCAGTTCTTACGATATTGTGTGCATCATATTGGTCAGCTTGGACGGCCCGGGAGGCAGCTATTGAACAGGATAAACTACTAAAGGATGCTTCAGATGAAATCCCAAACCCTACAAATGCTGGTGTTAGTGGAGTTGTAAATATGAATGTGAAAGCCGCGGTcctttttgttgtatttgcttCATGTTTCCTGTTTATGCTTTACAAACTGATGTCGTCGTGGTTCATTGAGGTTTTGGTTGTCCTCTTCTGTATTGGTGGGATAGAGGGCTTGCAAACTTGCTTGGTTGCTCTTCTGTCCAGGTGGTTCAAGCATGCTGGAGAGTCATACATCAAAGTACCTTTCTTAGGAGCTATCTCTTACCTGACTTTGGCTGTTTCTCCACTCTGTATAACAGTTGCCGTTCTCTGGGCAGTTTATCGCAATGAATCCTTTGGCTGGATTGGTCAAGATATACTTGGAATTGCACTGATAATCACAGTTCTACAGATTGTACATGTACCAAATCTCAAGGTTGGTTCAGTTCTTCTTGGCTGTGCCTTCATTTACGACATCTTTTGGGTGTTTGTCTCAAAGAAGTTTTTCAAGGAAAGCGTCATGATTGTGGTAGCCCGAGGTGATCGAAGTGGAGAAGATGGAATTCCCATGTTACTGAAGTTCCCACGCATTTTTGATCCATGGGGTGGTTACAGCATCATAGGTTTCGGAGACATACTTTTACCAGGAATGCTGGTGGCATTCTCACTCAGGTACGACTGGCTGGCAAATAAGAGCCTTAGAAGTGGATATTTCTTGTGGGCAATGTTTGCATATGGCTTTGGTCTTTTAATTACGTACGTGGCGCTAAACTTGATGGACGGGCATGGCCAACCAGCACTACTTTATATCGTTCCATTTACCCTTGGGACCTTGATGACATTGGGGCGGAAGCGAGGAGATTTGAGGGTTTTGTGGACTAGTGGAGAACCAGAAAGACCTTGCCCGCATGTTAGACTTCAACACAGTGGAGAACTAAGCCCTGAATGA 1632 0.4381 MASEKIYLILLFSAVILLLRDAPSVIAGDIVHDDDSTPKKPGCENQFVLVKVQTWVNGVEDAEFVGVGARFGKAIVSKEKNAHHTRLILSDPRDCCSQPKIKIVGDVIMVDRGNCTFTKKANTAQNANASAILIINNQKELYKMVCKPDETDLNIRIPAVMLPLDAGTRLEKMLTSTSSVFVQLYSPLRPAVDMAEVFLWMMAVLTILCASYWSAWTAREAAIEQDKLLKDASDEIPNPTNAGVSGVVNMNVKAAVLFVVFASCFLFMLYKLMSSWFIEVLVVLFCIGGIEGLQTCLVALLSRWFKHAGESYIKVPFLGAISYLTLAVSPLCITVAVLWAVYRNESFGWIGQDILGIALIITVLQIVHVPNLKVGSVLLGCAFIYDIFWVFVSKKFFKESVMIVVARGDRSGEDGIPMLLKFPRIFDPWGGYSIIGFGDILLPGMLVAFSLRYDWLANKSLRSGYFLWAMFAYGFGLLITYVALNLMDGHGQPALLYIVPFTLGTLMTLGRKRGDLRVLWTSGEPERPCPHVRLQHSGELSPE 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2869 543 Pfam PA domain 96 170 IPR003137 -
Ssu2g2869 543 SUPERFAMILY PA domain 97 179 IPR046450 -
Ssu2g2869 543 Gene3D - 31 187 - -
Ssu2g2869 543 PANTHER SIGNAL PEPTIDE PEPTIDASE-LIKE 2 9 539 - -
Ssu2g2869 543 Pfam Signal peptide peptidase 248 524 IPR007369 GO:0004190|GO:0016021
Ssu2g2869 543 PANTHER SIGNAL PEPTIDE PEPTIDASE 9 539 IPR007369 GO:0004190|GO:0016021
Ssu2g2869 543 SMART psh_8 246 513 IPR006639 GO:0004190|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2869 Ssu-Chr2 89864008 89870655 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2869 K09597 - gmx:100815915 1004.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2869 2 89864008 89870655 Ssu2g2869 2 89864008 89870655 ECH