Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2859 ATGAACAACTTCAAGTTAGGGGTAGATGTGGTTAGTGCTCACAATCTATTACCTAAAGATGGACAAGGTTCATCCAATGCCTTTGTGGAACTTTACTTTGATGGCCAAAAGTTCCGTACAACCATCAAAGAAAGGGATCTTAACCCTGTTTGGAATGAGAGCTTCTACTTCAATATATCTGACCCTTCTAATCTTCACTATCTCAAACTTGATGTCTATGTCCACAGCCATGCCAAAGCTACTAACGCCACTTCATTTCTTGGCAAAGTTAGCCTTACTGGGACTTCTTTTGTCCCTTACTCTGATGCAGTTGTCTTGCACTATCCATTGGAGAAGCGTGGTATTTTCTCTCATGTAAGAGGAGAGATTGGCCTTAAAGTTTACATCACTGATGACCCAACCATAAGATCATCTGTTCCAACTCCTGCCGTTGAGTCCATGCCAACAAATAATCCCAGCTTAACACATGCAGAAGTTCGAGCACCTGCAAGTGCAATGACAAACAGTTTGCCAAATGAAAAGGTTGAGTCAAGACACACATTTCATCATCTCCCTAACACAAACCATCAGCAGCAACAACAGCATTCCTCTGGCTTTGCAGATGCACATTATGTAACTAAGTATGAAGCTGATGAAATGAAATCTGAACCACAACCTATGAAGCTAGTACGCATGCACTCTGCTACATCAGTACAACCTGTTGATTTTGCACTTAAAGAAACAAGTCCATATCTTGGCGGGGGAAGAGTTGTTGGGGGTCGTGTTATTCATAAAGACAAGACTGCTAGTACATATGATCTTGTGGAAAGGATGTACTTTCTGTATGTCAGGGTTGTCAAGGCTCGTGAGCTTCCTGCTATGGATGTTACTGGGAGTCTTGATCCATTTGTTGAAGTGAGAATTGGCAATTACAAAGGTATTACCAAACACTTTGACAAGAATCAGAGTCCTGAATGGAATCAGGTGTTTGCCTTTTCAAAGGACCGGATGCAAGCATCCGTGCTAGATGTTGTGATCAAGGACAAGGATCTCATCAAAGATGATTTTGTAGGCATTGTAAGGTTTGACATCAATGAGGTTCCTTTGAGAGTACCACCAGATAGCCCTTTGGCACCAGAGTGGTACCGCCTTGAGGACAAGAAGGGAGAGAAGATTAAAGGTGAGCTGATGCTTGCTGTCTGGATTGGTACTCAAGCAGATGAGGCTTTTTCTGATGCGTGGCACTCAGATGCAGCCACACCTGTTGACAGCACACATGCTATCTCTGCAGTGATGCGTTCAAAGGTCTATCATGCACCAAGGTTATGGTATGTGCGTGTCAATGTTGTGGAGGCACAAGACTTGGTTCCTACAGAGAAAAACCGTTTTCCAGATGTGTATGCCAAGGTGCAGATAGGAAACCAAGTGCTGAAGACAAAGACAGTACCAGCCCATACTCTAAGTGCACTCTGGAATGAAGATCTTTTGTTTGTTGCTGCTGAACCTTTTGAAGATCATTTAATCATTTCAGTTGAAGATCGGGTTAGTCCTGGAAAAGATGAGATCATTGGGAGGGTCATCATACCACTGAACTCTGTGGAGAGGCTAGCAGATGATAGAATCATTCATTCTCGATGGTTCAACTTAGAAAAGCCAGTTGCTATAGATGTTGATcaattgaagaaagaaaagttcTCAAGCAGAATTCAGCTCCGTTTATGTCTAGATGGAGGATATCATGTTCTTGACGAGTCAACTCATTACAGCAGCGATCTTCGCCCCACAGCAAAGCAGCTGTGGAAGCCACCAATTGGGGTTTTAGAACTTGGAGTGCTGAATGCTGTAGGACTCCATCCAATGAAAACACGGGATGGTAGGGGCACATCTGACACATACTGTGTAGCAAAATATGGTCATAAATGGGTCAGAACAAGGACCATTGTTGATAATCTGCGTCCAAAATACAATGAGCAATACACTTGGGAGGTTTTTGATCATGCCACAGTTCTGACAGTTGGTGTCTTTGACAACAGCCAGATCGGGGAAAAGGGTAATGGGTCAAAGGACTTGAAAATTGGGAAGGTCAGAATTCGCATCTCTACTCTGGAAACAGGCAGGATTTACACTCACTCATATCCATTGTTGGTTCTTCACCCTACTGGGCTTAAGAAGATGGGGGAACTTCACTTGGCAATACGGTTTTCGTGCACTTCTTTTACAAACATGCTTTACCTATACTCACGACCACTGCTGCCAAAGATGCACTACATAAGGCCTTTCTCTGTGACACAGCTAGACATGCTACGTCACCAAGCAATGAACATAGTGGCAGCACGACTTGGCCGAGCAGAGCCACCACTTCGGAAGGAAGTGGTGGAATACATGTCAGATGTGGACTCTCACCTTTGGAGCATGCGCCGAAGCAAGGCAAATTTCTTCCGGCTGATGACTGTCTTCTCTGGTGTGTTTTCAGTTGTGAAGTGGTTTGGTGATATCTGCTTGTGGAGGAATCCTATTACAACAGTGCTGGTTCATGTGCTGTTTCTCATGCTTGTTTGCTTCCCAGAATTGATCTTGCCCACTGTTTTTCTCTACATGTTTTTGATAGGGGTATGGAACTTCAGATATCGACCAAGGTACCCTCCTCACATGAACACAAGAATCTCACAAGCCGAGGCAGTGCACCCGGATGAGTTAGACGAAGAGTTTGACACTTTCCCTACGAGCCGAAGCCCGGAACTTGTGAGAATGAGGTATGATCGTTTAAGGAGTGTGGCTGGAAGAATTCAAACAGTGGTTGGTGATTTGGCCAGCCAGGGAGAGAGGATTCAAGCACTGTTAAGCTGGAGAGACCCACGTGCTACAGCCATATTCATTACATTGTCTCTCCTATCTGCGTTGGTGCTGTATGTTACTCCTTTCCAAGCTGTGGCAGGTTTGGCAGGGTTTTACATCATGAGGCATCCGAGATTTCGCCACAGGCTGCCATGTGCCCCAGTCAACTTCTTCCGGCGCCTGCCTGCTAGAACAGACACTCTGTTGTAG 3024 0.4451 MNNFKLGVDVVSAHNLLPKDGQGSSNAFVELYFDGQKFRTTIKERDLNPVWNESFYFNISDPSNLHYLKLDVYVHSHAKATNATSFLGKVSLTGTSFVPYSDAVVLHYPLEKRGIFSHVRGEIGLKVYITDDPTIRSSVPTPAVESMPTNNPSLTHAEVRAPASAMTNSLPNEKVESRHTFHHLPNTNHQQQQQHSSGFADAHYVTKYEADEMKSEPQPMKLVRMHSATSVQPVDFALKETSPYLGGGRVVGGRVIHKDKTASTYDLVERMYFLYVRVVKARELPAMDVTGSLDPFVEVRIGNYKGITKHFDKNQSPEWNQVFAFSKDRMQASVLDVVIKDKDLIKDDFVGIVRFDINEVPLRVPPDSPLAPEWYRLEDKKGEKIKGELMLAVWIGTQADEAFSDAWHSDAATPVDSTHAISAVMRSKVYHAPRLWYVRVNVVEAQDLVPTEKNRFPDVYAKVQIGNQVLKTKTVPAHTLSALWNEDLLFVAAEPFEDHLIISVEDRVSPGKDEIIGRVIIPLNSVERLADDRIIHSRWFNLEKPVAIDVDQLKKEKFSSRIQLRLCLDGGYHVLDESTHYSSDLRPTAKQLWKPPIGVLELGVLNAVGLHPMKTRDGRGTSDTYCVAKYGHKWVRTRTIVDNLRPKYNEQYTWEVFDHATVLTVGVFDNSQIGEKGNGSKDLKIGKVRIRISTLETGRIYTHSYPLLVLHPTGLKKMGELHLAIRFSCTSFTNMLYLYSRPLLPKMHYIRPFSVTQLDMLRHQAMNIVAARLGRAEPPLRKEVVEYMSDVDSHLWSMRRSKANFFRLMTVFSGVFSVVKWFGDICLWRNPITTVLVHVLFLMLVCFPELILPTVFLYMFLIGVWNFRYRPRYPPHMNTRISQAEAVHPDELDEEFDTFPTSRSPELVRMRYDRLRSVAGRIQTVVGDLASQGERIQALLSWRDPRATAIFITLSLLSALVLYVTPFQAVAGLAGFYIMRHPRFRHRLPCAPVNFFRRLPARTDTLL 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2859 1007 CDD C2A_MCTP_PRT_plant 5 131 - -
Ssu2g2859 1007 ProSiteProfiles C2 domain profile. 415 540 IPR000008 -
Ssu2g2859 1007 ProSiteProfiles C2 domain profile. 255 375 IPR000008 -
Ssu2g2859 1007 Gene3D C2 domain 1 130 IPR035892 -
Ssu2g2859 1007 Pfam C2 domain 274 368 IPR000008 -
Ssu2g2859 1007 Pfam C2 domain 599 707 IPR000008 -
Ssu2g2859 1007 Pfam C2 domain 436 541 IPR000008 -
Ssu2g2859 1007 Pfam C2 domain 5 93 IPR000008 -
Ssu2g2859 1007 SMART C2_3c 273 369 IPR000008 -
Ssu2g2859 1007 SMART C2_3c 599 704 IPR000008 -
Ssu2g2859 1007 SMART C2_3c 437 535 IPR000008 -
Ssu2g2859 1007 SMART C2_3c 5 106 IPR000008 -
Ssu2g2859 1007 ProSiteProfiles C2 domain profile. 581 705 IPR000008 -
Ssu2g2859 1007 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 139 IPR035892 -
Ssu2g2859 1007 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 4 1007 - -
Ssu2g2859 1007 CDD C2B_MCTP_PRT_plant 273 397 - -
Ssu2g2859 1007 CDD C2C_MCTP_PRT_plant 437 587 - -
Ssu2g2859 1007 ProSiteProfiles C2 domain profile. 1 108 IPR000008 -
Ssu2g2859 1007 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 4 1007 - -
Ssu2g2859 1007 Gene3D C2 domain 575 728 IPR035892 -
Ssu2g2859 1007 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 436 589 IPR035892 -
Ssu2g2859 1007 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 272 411 IPR035892 -
Ssu2g2859 1007 Gene3D C2 domain 255 395 IPR035892 -
Ssu2g2859 1007 Gene3D C2 domain 418 568 IPR035892 -
Ssu2g2859 1007 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 598 730 IPR035892 -
Ssu2g2859 1007 CDD C2D_MCTP_PRT_plant 599 724 - -
Ssu2g2859 1007 Pfam Plant phosphoribosyltransferase C-terminal 852 1007 IPR013583 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2859 Ssu-Chr2 89698270 89701293 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2859 174 1007 Lipid Metabolism Gene Families AT4G11610 77.791 0.0 1400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2859 - - gmx:100777951 1917.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2859 2 89698270 89701293 Ssu2g2859 2 89698270 89701293 ECH