Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2818 ATGAAAACCCTAATCGGGGTCTATCCAACGGTCCCAATTGAAAtttCTGAAAGTGCCCTTTTCAGCAAAGGAGGCTTTCCATTCGTTTCAGCCAATTCCACTGTCTCCTTCAGAGTATCGATTTTCTGCTTCTGCTTTTGCATAACCGCAATTGCCACAAAACCCTATTTCCCCAAATCGGTGATGAAAGGTTCGAAGCGTTTGACTGTGTCGGAACCCAACCAGGTCGATACCAACGAAACCGTGTTCCGGAATAAAAGAATAATGGAAGGATCCCTCTTTGATGTCCATAGGGCTGAACCATCCCAACAACCAATGGTAGCAGCACCACCGTTGGATATGAAACGGGCAGAGTCATCACAGCAGCATGTGAGAGCTTTAAATAGCCAGTTTGCAAGTTGGGTTCAAACACAACTAAAGAATCATCCTGATGAGCTTTGGGAAGATGGTGTCAGAGATTACTTAGATCATGCTTCAAACATTATGGAAAAGTTTAGTGATGTTGTCAAGTGGCTCAAAGCAAATGCCACCAAGCCAGAAAATTCAGCTGCTGATGCTGGTGCTTCTTTTTCTGGGAAAAAGCTCTTGCCTGAAgtaataaacaaagaaaataaatcttttgGAGAAAAAACTGGGTCTACTCCTGTTAGCACTGCCACAAATTTTACTAGTTCGTGGAGCCCTGGATTATTTTCAAACAGCCAAAACATTTTTGCATTTGGAAATCAAAGTTCAGCTCCCTCTAACCACAACACTTCAGATGATGTAGATGGTGAAAATGAATTGGAGCAGCCTAGCAGCCCATCAGTTAAGAAGTCAGAAGAGAAAGGTGTAGTAGTTGTACATGAAGTAAAGTGCAAGCTTTATGtgaagTCAAGTGATCCAGCAGATAAAGATGTGTGGAAAGATAAAGGAATGGGCCAACTATCTATTAAATGCAAAGAGGGTGTCAGCAAGGCTACCAAAGAGTCCAAACCTACAATTGTTGTTCGAAATGAGGTAGGAAAAATTCTTCTCAATGCTTTGTTGTATCCAGGAATCAAGACAAATCTGCAGAAGAACTCTCTTGTTGCAATATTCCACACTTCGAGTAATGCTGACGGAAGTGGTGGAGATAATGATAGTGTTGTTGCACGTACATTCTTGATCCGGATGAAAACAGAAGATGATCGAAATAAACTGGCTTCAACCATCCAAGAATATGCTCCAGTGTCTTGA 1218 0.4105 MKTLIGVYPTVPIEISESALFSKGGFPFVSANSTVSFRVSIFCFCFCITAIATKPYFPKSVMKGSKRLTVSEPNQVDTNETVFRNKRIMEGSLFDVHRAEPSQQPMVAAPPLDMKRAESSQQHVRALNSQFASWVQTQLKNHPDELWEDGVRDYLDHASNIMEKFSDVVKWLKANATKPENSAADAGASFSGKKLLPEVINKENKSFGEKTGSTPVSTATNFTSSWSPGLFSNSQNIFAFGNQSSAPSNHNTSDDVDGENELEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSSDPADKDVWKDKGMGQLSIKCKEGVSKATKESKPTIVVRNEVGKILLNALLYPGIKTNLQKNSLVAIFHTSSNADGSGGDNDSVVARTFLIRMKTEDDRNKLASTIQEYAPVS 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2818 405 Gene3D - 198 404 IPR011993 -
Ssu2g2818 405 ProSiteProfiles Ran binding domain type 1 profile. 272 400 IPR000156 GO:0046907
Ssu2g2818 405 SMART ranbd_3 262 401 IPR000156 GO:0046907
Ssu2g2818 405 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP50 64 403 - -
Ssu2g2818 405 SUPERFAMILY PH domain-like 272 402 - -
Ssu2g2818 405 Pfam RanBP1 domain 270 400 IPR000156 GO:0046907
Ssu2g2818 405 MobiDBLite consensus disorder prediction 241 275 - -
Ssu2g2818 405 CDD RanBD_NUP50 274 402 - -
Ssu2g2818 405 PANTHER RAN BINDING PROTEIN 64 403 IPR045255 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2818 K14295 - gmx:100816975 608.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2818 2 89169074 89175997 Ssu2g2818 2 89169074 89175997 ECH