Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2815 atgcatCCACCTTGCGCAGGAGAAGCATCACAGCCCTGCTACAACGCctgttttccttcttttcttgcCTCTTACCCTGACAAGTTTCATAACACTCCCAATTCTAGCCATGACTTCGAGGCTGCCACATCTTCCACTCTTCATCCATACACCCAATTCACCAACCATGAGGCCCTCCCTTCTTTGGAAGAGTCATATATTAACTTCACCAAAGCATACCCTCCATTTGGCAATACTTCTCAAGTTGATCAGATCCGTGCCCAAGAATATCATCACTTGAACCCCTCCAACATTTGTTTTGACTACACCGGATATGGCCTTTTCTCCCACGCTCAGGAGCAAACAACTTCAGCTGCTTCTTCATATTCTTGTCCTCCTCCATCCTTGCGTGAACCACCCTTCTTTGTTATCTCCTACAAGCCTGTAACCTTGCATTCTCAGATACTCTATGGTGGTCAGGAATTTGAACTAGAATCCAAAATCAGAGAAAGAATCATGGCGTTTATGAACATCTCTGAAGCTGATTACGCCCTTGTTTTCATTGCCAACGAGGTATCTGCCTTTAAACTTATAGCAGATTCTTTCCAATTTCAACCTGATGGAGAACTCCTCACAGTGTACGACCACAAGAGCGAGGCAGTGGATGCGATGATTGAGATATGCAAGGAGCAAGGAATTCATGTCTTGTCAGCTAAATTCTACTGGCCCAGTCTCAGAATCATGGGAAGAAAACTGAAGAAGATGATAATGAGCAGAAGGGGTAAAAGAAAGAGAGGTCTATTTGTTTTCCCACTTCACTCAAGGGTTACTGGGACACCATATTCATATATTTGGATGTCCTTGGCACAAGAAAATGGGTGGCGTGTCTTGCTTGATGCACGTGCACTGGGACCTAAGGAGATGGACACATTGGGTCTCACTATGTTTAAGCCTGATTTTATGGTCTGTTCCTTTTACAAAGTTTTTGGTGAAAATCCATCAGGTTTTGGGTGCTTGTTCATCAAGAAATCCAGTATCTCTGCTCTAAAAGAATCAAGAAATCCTACAAGCATGGTAATTATAGGCCTCTCTCCAGTATTTAGACAAGAAACTGAACCAAAAGCAAGACAAGAAGATGGATCAGTGTCACCACATGGGACTGAACAAGTGCTGTCATCAGAAATTGTGGAGTTAAGCCCATCCCTTGAGTCAGGTCAATCTAGAGAAAGATTAGGCACAGTGAGTGGGGGCTTAGAGATTGAGTGTAGAGGATTGGACCATGCTGACTCGGTGGGGCTAATGGTAATTAGCTGCAGGGGTAAGTATCTTATCAATTGGCTCGTTAATGCATTAATGAGTCTTCAACATCCACATCCTCCAACTGGGCTTTCTCTAATTAGGATATATGGACCTAAGATAAGTTCACACCGTGGACATGTTGTGGCATTTAATGTATTTGATTGGAAAGGTGAAAAGGTGGATCCTGCAGTTGTACAGAAACTAGCAGATCGGAACAATATCTCTTTGAGTAGTGCATTTTTGCAAAGCATATGGTTCTCGGACAGGAGTGATGAAGAGACACAAAGGACTTTGGAAAGCAGAGTGCATAGGGTGAAAGTGTTGGGCCAATCTAATAAGACACAGAAAAGTGATTTTGGGATAACTGTGGTGACAGCTGCACTTAGTTTGTTGACAAACTTTGAAGATGTGTACAGGCTATGGGCTTTTCTTTCCAGATTCCTAGATGCAGACTTTGTGCAGAAAGAGAGATGGAGATATATGGCTCTAAATCAAAAAACCATTGATATATGA 1791 0.4221 MHPPCAGEASQPCYNACFPSFLASYPDKFHNTPNSSHDFEAATSSTLHPYTQFTNHEALPSLEESYINFTKAYPPFGNTSQVDQIRAQEYHHLNPSNICFDYTGYGLFSHAQEQTTSAASSYSCPPPSLREPPFFVISYKPVTLHSQILYGGQEFELESKIRERIMAFMNISEADYALVFIANEVSAFKLIADSFQFQPDGELLTVYDHKSEAVDAMIEICKEQGIHVLSAKFYWPSLRIMGRKLKKMIMSRRGKRKRGLFVFPLHSRVTGTPYSYIWMSLAQENGWRVLLDARALGPKEMDTLGLTMFKPDFMVCSFYKVFGENPSGFGCLFIKKSSISALKESRNPTSMVIIGLSPVFRQETEPKARQEDGSVSPHGTEQVLSSEIVELSPSLESGQSRERLGTVSGGLEIECRGLDHADSVGLMVISCRGKYLINWLVNALMSLQHPHPPTGLSLIRIYGPKISSHRGHVVAFNVFDWKGEKVDPAVVQKLADRNNISLSSAFLQSIWFSDRSDEETQRTLESRVHRVKVLGQSNKTQKSDFGITVVTAALSLLTNFEDVYRLWAFLSRFLDADFVQKERWRYMALNQKTIDI 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2815 596 PANTHER MOLYBDENUM COFACTOR SULFURASE-LIKE PROTEIN 3 596 - -
Ssu2g2815 596 Gene3D Aspartate Aminotransferase, domain 1 411 582 IPR015422 GO:0003824
Ssu2g2815 596 Gene3D - 144 386 IPR015421 GO:0003824
Ssu2g2815 596 PANTHER MOLYBDOPTERIN COFACTOR SULFURASE MOSC 3 596 - -
Ssu2g2815 596 SUPERFAMILY PLP-dependent transferases 142 575 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2815 Ssu-Chr2 89098239 89100029 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2815 - - gmx:100809950 1020.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2815 2 89098239 89100029 Ssu2g2815 2 89098239 89100029 ECH
Ssu7g0731 7 14720391 14722340 Ssu2g2815 2 89098239 89100029 ECH