Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2808 ATGGGTACTCTAACTACTGTTCCTGTGCTCCCTTCTAAGCTTAAGCCTTCGCTTTCTCCGCGGCAAAATTCTCTTTTTCCCTATGGAAGACGGCACGGCAAGAAGAACAAAGCAATTGTTCctGTTGCTAGGTTGTTCGGGCCGGCCATATTTGAAGCCTCAAAGCTGAAGGTTTTGTTCTTGGGAGTGGACGAAAGTAAACACCCAGGAAATCTCCCAAGGACTTATACGCTAACCCACAGTGATATAACCGCTAAGCTCACTTTGGCAATCTCTCAAACCATAAATAACTCTCAGTTGCAGGGGTGGTACAACAGATTGCAAAGGGACGAAGTGGTGGCACAGTGGAAGAAGGTGAAGGGAAAGATGTCTCTGCACGTTCACTGCCACATTAGTGGAGGTCATTTTCTGTTAGATATGTTAGCTAGGTTAAGATACTTCATCTTCTGTAAGGAGCTACCTGTGGTGTTGAAGGCCGTCGTTCACGGCGATGGCAACCTATTCAACAACTACCCCGAATTGCAAGAAGCCTTGGTTTGGGTTTATTTCCACTCAAACATTCCAGAATTCAACAAGGTAGAATGTTGGGGTCCACTGAAGGAAGCATCAGCACCCACATGTGGGACCCAGGAAGAGAGTAAGCAAGAAACTCTTCCAAGCAAGGAGGGGTTGGCAATTCCACAGTCATGCCTAGACGAATGTGAATGTTGTTTTCCCCCGCTGACGTTGAGCCCAATTCAGTGGTCTCAAGAAGTTCCCAGCCACCATTACGAACCTTATGATGGGATGGGGACCCAACGAAATCTATAA 810 0.4679 MGTLTTVPVLPSKLKPSLSPRQNSLFPYGRRHGKKNKAIVPVARLFGPAIFEASKLKVLFLGVDESKHPGNLPRTYTLTHSDITAKLTLAISQTINNSQLQGWYNRLQRDEVVAQWKKVKGKMSLHVHCHISGGHFLLDMLARLRYFIFCKELPVVLKAVVHGDGNLFNNYPELQEALVWVYFHSNIPEFNKVECWGPLKEASAPTCGTQEESKQETLPSKEGLAIPQSCLDECECCFPPLTLSPIQWSQEVPSHHYEPYDGMGTQRNL 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2808 269 PANTHER PROTEIN STAY-GREEN 1, CHLOROPLASTIC 1 256 - -
Ssu2g2808 269 Pfam Staygreen protein 51 202 IPR024438 -
Ssu2g2808 269 PANTHER PROTEIN STAY-GREEN 1, CHLOROPLASTIC-RELATED 1 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2808 Ssu-Chr2 88983882 88985733 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2808 K22013 - gmx:732541 506.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2808 2 88983882 88985733 Ssu2g2808 2 88983882 88985733 ECH