Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2804 ATGCAATGTATCCCGAAGGAATATGTGAGGCCGAAAGAAGAGTTGAACAGCATAGGGAACGTGTTCGAGGAGGAAAAGAAGGAAGGGCCTGAAGTTCCAACGATTGACTTGAGAGAAATAGACTCCGAGGACGAGGTTGTTCGAGCGAAATGCCGAGAGAAGCTGAAGAAAGCAGCGCAGGAATGGGGGGTGATGCACTTGGTGAATCACGGCATCCCTGATGAGCTGATAAATCGCCTGAAGAAAGCAGGGGAAGCCTTCTTCGCTCTCCCCATTGAGGAAAAGGAGAAGTACGCCAATGACCAGGCCTCGGGGAAGATTCAAGGCTACGGAAGCAAGCTCGCCAACAATGCCAGTGGTCGACTCGAGTGGGAAGACTACTTCTTCCACCTTGCTTTCCCTGAGGACAGGCGCGACCTTTCCATCTGGCCCAAAAAACCCGAGGATTATATTGAAGTTACAAGCGAGTATGCAAGGCTACTGAGGGGGCTTGCGACCAGGATTCTAAAGGCACTATCTATTGCATTGGGGCTGGAAGGAGGGAGGTTGGAGAAGGAAGTTGGTGGGATGGAAGAGCTTTTACTTCAATTGAAGATCAACTACTACCCAATTTGCCCCCAGCCAGAGCTGGCTCTGGGAGTTGAAGCCCACACCGATGTAAGTTCACTCACTTTCCTCCTCCATAACATGGTGCCAGGTCTGCAGCTTTTCTATGAAGGCCAATGGATTACAGCAAAATGCGTCCCCGATTCCATTCTTATGCACATTGGTGACACCATTGAGATCCTTAGCAACGGCAAGTACAAGAGTATTCTTCACAGGGGGTTGGTGAACAAGGAAAAGGTTAGAATATCGTGGGCAGTGTTCTGTGAGCCCCCCAAGGAGAAGATCATCCTGCAGCCACTTCCTGAGCTTGTCACTGAAACAGAACCAGCACGCTTCCCCCCTCGCACTTTTGATCAACATATTCAGCACAAACTATTCAGGAAGGATAAGGAAGGTCTCACAAAGTGA 1014 0.498 MQCIPKEYVRPKEELNSIGNVFEEEKKEGPEVPTIDLREIDSEDEVVRAKCREKLKKAAQEWGVMHLVNHGIPDELINRLKKAGEAFFALPIEEKEKYANDQASGKIQGYGSKLANNASGRLEWEDYFFHLAFPEDRRDLSIWPKKPEDYIEVTSEYARLLRGLATRILKALSIALGLEGGRLEKEVGGMEELLLQLKINYYPICPQPELALGVEAHTDVSSLTFLLHNMVPGLQLFYEGQWITAKCVPDSILMHIGDTIEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKEKIILQPLPELVTETEPARFPPRTFDQHIQHKLFRKDKEGLTK 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2804 337 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 2 333 - -
Ssu2g2804 337 Coils Coil 332 337 - -
Ssu2g2804 337 Gene3D - 1 335 IPR027443 -
Ssu2g2804 337 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 2 333 - -
Ssu2g2804 337 SUPERFAMILY Clavaminate synthase-like 2 329 - -
Ssu2g2804 337 Pfam non-haem dioxygenase in morphine synthesis N-terminal 32 145 IPR026992 -
Ssu2g2804 337 Pfam 2OG-Fe(II) oxygenase superfamily 197 292 IPR044861 -
Ssu2g2804 337 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 193 292 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2804 Ssu-Chr2 88934099 88936988 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g2804 31 336 Glycosyltransferase AT5G59530 29.299 2.14e-38 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2804 K05277 - gmx:547615 628.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2804 2 88934099 88936988 Ssu2g2804 2 88934099 88936988 ECH