Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2801 ATGTCTTCTGATAGTGCAAAGGAAAATGCATCAGTAGTTGATTCATCCGTCACTGAGTGGAGGCATGACATTGGAAATTCAGATGATCCAGAGAGTTCCGGTTACAAGTTTAATGAAAACATTAATCCAACTAGGGCAGTGGGACACTCTCATGGTCAGATAGGGCATCCAACAGGAATTGGAGTGGAAAAATGGCacaatatgaaatattttatcattaagaGTTTGAACCATCAAAACATCCGTTTGTCGATTGAGAAAGGAATTTGGGCTACTCAAATCATGAATGAACCGATTCTAGAAGAAGCTTTTCATAATTCAGGCAGCGTAATCCTTATATTTAGTGTCAACATGAGTGGTTCCTTCCAAGGGTATGCACAAATGATGTCCTCTATTGGAAGGGGGAGAGACAATGTTTGGAGTGAGGGAACTGGTAAAAGTAATCCTTGGGGTCGCAGCTTTAAGGTCAAATGGCTGTGTTTGAATGATTTGCCATTCCACAAGACTCTACATCTCAAGAATTCATTGAATGACTATAAGCCTGTCAAAATTAGCAGAGATTGCCagGAGTTATCTCCAGACATTGGTCTAGCTCTTTGTGAACTCCTTGATGGTAAGAATGATACGGATGGCCTGCTGACCAGTTCATCAAGGGATGATTTTTCTTCAAAGGGGTATTATGTGAATACTCCAAGTTCAATGGGAGATGAAGACTGTAACTTTCCTCCACTGCATTTGTCATGGTCAATGCCTCTGCCTTATTCTTCCTTGTTTTACCAAAATCAACCAgaagtaaataaatttcattcaacaaaCCAGAGATTCGGTGGGACAATGTTCACTGAAATATTGCCAACCCCTTCTGAGTCATCACAAGTGTCAGGGAATAAATGTTCTCATTTTAGTGGGCATAACCCGAAGCTACAAATGAACAAGGACGTGGCTTCTCAATTTGATTTTTGGGGTCTATCTTCGGGAAGCCCTTTAGCTAGTACCCTAACCGAGGATGATTTTCTTGACATGATCTGGTTAGAGAGCATAGATTGCATCAACTTGTCATTTGGGTTGGATCATTGGACAGCTGAAAAGCATGTGAAGTCCTATGAAGAATACCTGGAGGTCCATAGCAGATGCAGGAAACAGTTACTCATCAATACAACTAAACCATCTTGGAAGCAACTGGAATCGTTGAGAAGTAATTTGCAAGATGATAGGAATTTAGAAGACGAGGTTCATAGAGACAGGAGCAACTCATGGGAGGATACATCAGTCATCTTTGCCATGGATATAACTGCTCCTCCAATATGCAAACATGGTAACTTTTCGTCAGCTAAATTTTGCACGTGTTGTGGTGTTGTCATCCTCAAGGAGGCCCTTTTCCTGTTTTCCAAAAGCAAATACGAAATGGAagttaattgtaatttttctaaaattaggaCTTGA 1443 0.3922 MSSDSAKENASVVDSSVTEWRHDIGNSDDPESSGYKFNENINPTRAVGHSHGQIGHPTGIGVEKWHNMKYFIIKSLNHQNIRLSIEKGIWATQIMNEPILEEAFHNSGSVILIFSVNMSGSFQGYAQMMSSIGRGRDNVWSEGTGKSNPWGRSFKVKWLCLNDLPFHKTLHLKNSLNDYKPVKISRDCQELSPDIGLALCELLDGKNDTDGLLTSSSRDDFSSKGYYVNTPSSMGDEDCNFPPLHLSWSMPLPYSSLFYQNQPEVNKFHSTNQRFGGTMFTEILPTPSESSQVSGNKCSHFSGHNPKLQMNKDVASQFDFWGLSSGSPLASTLTEDDFLDMIWLESIDCINLSFGLDHWTAEKHVKSYEEYLEVHSRCRKQLLINTTKPSWKQLESLRSNLQDDRNLEDEVHRDRSNSWEDTSVIFAMDITAPPICKHGNFSSAKFCTCCGVVILKEALFLFSKSKYEMEVNCNFSKIRT 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2801 480 MobiDBLite consensus disorder prediction 1 35 - -
Ssu2g2801 480 PANTHER YTH DOMAIN-CONTAINING PROTEIN 1 9 323 - -
Ssu2g2801 480 MobiDBLite consensus disorder prediction 1 16 - -
Ssu2g2801 480 Pfam YT521-B-like domain 69 203 IPR007275 GO:0003723
Ssu2g2801 480 Gene3D ph1033 like domains 61 215 - -
Ssu2g2801 480 ProSiteProfiles YTH domain profile. 68 203 IPR007275 GO:0003723
Ssu2g2801 480 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 9 323 IPR045168 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2801 Ssu-Chr2 88910791 88914047 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2801 K20100 - gmx:100784130 667.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2801 2 88910791 88914047 Ssu2g2801 2 88910791 88914047 ECH